5ykj

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Structural basis of the thiol resolving mechanism in yeast mitochondrial 1-Cys peroxiredoxin via glutathione/thioredoxin systems

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 ==Structural basis of the thiol resolving mechanism in yeast mitochondrial 1-Cys peroxiredoxin via glutathione/thioredoxin systems==
-<StructureSection load='5ykj' size='340' side='right' caption='[[5ykj]], [[Resolution|resolution]] 1.53&Aring;' scene=''>
+<StructureSection load='5ykj' size='340' side='right'caption='[[5ykj]], [[Resolution|resolution]] 1.53&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5ykj]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YKJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YKJ FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5ykj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YKJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YKJ FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.53&#8491;</td></tr>
-<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxiredoxin Peroxiredoxin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.15 1.11.1.15] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ykj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ykj OCA], [https://pdbe.org/5ykj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ykj RCSB], [https://www.ebi.ac.uk/pdbsum/5ykj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ykj ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ykj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ykj OCA], [http://pdbe.org/5ykj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ykj RCSB], [http://www.ebi.ac.uk/pdbsum/5ykj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ykj ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/PRX1_YEAST PRX1_YEAST]] Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events. Involved in mitochondrial protection of cadmium-induced oxidative stress.<ref>PMID:10821871</ref> <ref>PMID:19332553</ref> <ref>PMID:20059400</ref>
+[https://www.uniprot.org/uniprot/PRX1_YEAST PRX1_YEAST] Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events. Involved in mitochondrial protection of cadmium-induced oxidative stress.<ref>PMID:10821871</ref> <ref>PMID:19332553</ref> <ref>PMID:20059400</ref>
+==See Also==
+*[[Peroxiredoxin 3D structures|Peroxiredoxin 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Peroxiredoxin]]
+[[Category: Large Structures]]
-[[Category: Bao, R]]
+[[Category: Saccharomyces cerevisiae S288C]]
-[[Category: He, L H]]
+[[Category: Bao R]]
-[[Category: Li, C C]]
+[[Category: He LH]]
-[[Category: Li, T]]
+[[Category: Li CC]]
-[[Category: Liu, L]]
+[[Category: Li T]]
-[[Category: Peng, C T]]
+[[Category: Liu L]]
-[[Category: Song, Y J]]
+[[Category: Peng CT]]
-[[Category: Yang, J]]
+[[Category: Song YJ]]
-[[Category: Yang, M J]]
+[[Category: Yang J]]
-[[Category: Zhao, C]]
+[[Category: Yang MJ]]
-[[Category: Zhao, N L]]
+[[Category: Zhao C]]
-[[Category: Zhu, Y B]]
+[[Category: Zhao NL]]
-[[Category: 1-cys peroxiredoxin]]
+[[Category: Zhu YB]]
-[[Category: Glutathione]]
-[[Category: Saccharomyces cerevisiae]]
-[[Category: Thioredoxin]]
-[[Category: Transferase]]

5ykj

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Structural basis of the thiol resolving mechanism in yeast mitochondrial 1-Cys peroxiredoxin via glutathione/thioredoxin systems

Structural highlights

Function

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