6inb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6inb" [edit=sysop:move=sysop])
Current revision (09:46, 22 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6inb is ON HOLD
+
==Crystal structure of an acetolactate decarboxylase from Klebsiella pneumoniae==
 +
<StructureSection load='6inb' size='340' side='right'caption='[[6inb]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6inb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae Klebsiella pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6INB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6INB FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6inb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6inb OCA], [https://pdbe.org/6inb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6inb RCSB], [https://www.ebi.ac.uk/pdbsum/6inb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6inb ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/W9BHF3_KLEPN W9BHF3_KLEPN]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Acetolactate decarboxylase (ALDC) is a well-characterized anabolic enzyme involved with 3-hydroxy butanone (acetoin), an important physiological metabolite excreted by microbes. Although the enzyme is widely present in microorganisms, few atomic structures and functions of ALDC have been reported to date. Here we report the crystal structure of ALDC from Klebsiella pneumoniae KP (KpALDC). KpALDC crystallizes in space group P3121 with one monomer per asymmetric unit. Analytical ultracentrifugation data shows that KpALDC forms a stable dimer but can exist as a tetramer in solution. A Zn(2+) ion is coordinated by three strictly-conserved histidines (His198, His200 and His211) and a conserved glutamate (Glu69), but the C-terminal tail that forms part of the active site in ALDC enzymes is disordered. A complex structure with ethane-1,2-diol shows a unusual mode of binding, whereby the ligand does not coordinate the Zn(2+) ion. MicroScale Thermophoresis analysis shows that KpALDC binds Zn(2+) ions, but no binding of Mg(2+), Ca(2+) and Mn(2+) ions was detected.
-
Authors:
+
Structural characterization of an acetolactate decarboxylase from Klebsiella pneumoniae.,Wu W, Zhao Q, Che S, Jia H, Liang H, Zhang H, Liu R, Zhang Q, Bartlam M Biochem Biophys Res Commun. 2019 Jan 29;509(1):154-160. doi:, 10.1016/j.bbrc.2018.12.094. Epub 2018 Dec 21. PMID:30580999<ref>PMID:30580999</ref>
-
Description:
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
 +
<div class="pdbe-citations 6inb" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Klebsiella pneumoniae]]
 +
[[Category: Large Structures]]
 +
[[Category: Bartlam M]]
 +
[[Category: Wu W]]
 +
[[Category: Zhang Q]]

Current revision

Crystal structure of an acetolactate decarboxylase from Klebsiella pneumoniae

PDB ID 6inb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools