6mv0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6mv0" [edit=sysop:move=sysop])
Current revision (06:39, 11 October 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6mv0 is ON HOLD
+
==CO-bound Sperm Whale Myoglobin, room temperature structure solved by serial 5degree oscillation crystallography==
 +
<StructureSection load='6mv0' size='340' side='right'caption='[[6mv0]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6mv0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MV0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6MV0 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6mv0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mv0 OCA], [https://pdbe.org/6mv0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6mv0 RCSB], [https://www.ebi.ac.uk/pdbsum/6mv0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6mv0 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
A fixed-target approach to high-throughput room-temperature serial synchrotron crystallography with oscillation is described. Patterned silicon chips with microwells provide high crystal-loading density with an extremely high hit rate. The microfocus, undulator-fed beamline at CHESS, which has compound refractive optics and a fast-framing detector, was built and optimized for this experiment. The high-throughput oscillation method described here collects 1-5 degrees of data per crystal at room temperature with fast (10 degrees s(-1)) oscillation rates and translation times, giving a crystal-data collection rate of 2.5 Hz. Partial datasets collected by the oscillation method at a storage-ring source provide more complete data per crystal than still images, dramatically lowering the total number of crystals needed for a complete dataset suitable for structure solution and refinement - up to two orders of magnitude fewer being required. Thus, this method is particularly well suited to instances where crystal quantities are low. It is demonstrated, through comparison of first and last oscillation images of two systems, that dose and the effects of radiation damage can be minimized through fast rotation and low angular sweeps for each crystal.
-
Authors: Finke, A.D., Wierman, J.L., Pare-Labrosse, O., Sarrachini, A., Besaw, J., Mehrabi, P., Gruner, S.M., Miller, R.J.D.
+
Fixed-target serial oscillation crystallography at room temperature.,Wierman JL, Pare-Labrosse O, Sarracini A, Besaw JE, Cook MJ, Oghbaey S, Daoud H, Mehrabi P, Kriksunov I, Kuo A, Schuller DJ, Smith S, Ernst OP, Szebenyi DME, Gruner SM, Miller RJD, Finke AD IUCrJ. 2019 Feb 23;6(Pt 2):305-316. doi: 10.1107/S2052252519001453. eCollection, 2019 Mar 1. PMID:30867928<ref>PMID:30867928</ref>
-
Description: CO-bound Sperm Whale Myoglobin, room temperature structure solved by serial 5degree oscillation crystallography
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Mehrabi, P]]
+
<div class="pdbe-citations 6mv0" style="background-color:#fffaf0;"></div>
-
[[Category: Pare-Labrosse, O]]
+
 
-
[[Category: Gruner, S.M]]
+
==See Also==
-
[[Category: Besaw, J]]
+
*[[Myoglobin 3D structures|Myoglobin 3D structures]]
-
[[Category: Finke, A.D]]
+
== References ==
-
[[Category: Miller, R.J.D]]
+
<references/>
-
[[Category: Sarrachini, A]]
+
__TOC__
-
[[Category: Wierman, J.L]]
+
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Physeter catodon]]
 +
[[Category: Besaw J]]
 +
[[Category: Finke AD]]
 +
[[Category: Gruner SM]]
 +
[[Category: Mehrabi P]]
 +
[[Category: Miller RJD]]
 +
[[Category: Pare-Labrosse O]]
 +
[[Category: Sarrachini A]]
 +
[[Category: Wierman JL]]

Current revision

CO-bound Sperm Whale Myoglobin, room temperature structure solved by serial 5degree oscillation crystallography

PDB ID 6mv0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools