3bfw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:37, 21 November 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of truncated FimG (FimGt) in complex with the donor strand peptide of FimF (DSF)==
==Crystal structure of truncated FimG (FimGt) in complex with the donor strand peptide of FimF (DSF)==
-
<StructureSection load='3bfw' size='340' side='right' caption='[[3bfw]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='3bfw' size='340' side='right'caption='[[3bfw]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3bfw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecow3 Ecow3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BFW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BFW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3bfw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Escherichia_coli_str._K-12_substr._W3110 Escherichia coli str. K-12 substr. W3110]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BFW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BFW FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=YT3:YTTRIUM+(III)+ION'>YT3</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3bfq|3bfq]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=YT3:YTTRIUM+(III)+ION'>YT3</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fimG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=316407 ECOW3])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bfw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bfw OCA], [https://pdbe.org/3bfw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bfw RCSB], [https://www.ebi.ac.uk/pdbsum/3bfw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bfw ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bfw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bfw OCA], [http://pdbe.org/3bfw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3bfw RCSB], [http://www.ebi.ac.uk/pdbsum/3bfw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3bfw ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/FIMG_ECOLI FIMG_ECOLI]] Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Involved in the integration of FimH in the fimbriae. [[http://www.uniprot.org/uniprot/FIMF_ECOLI FIMF_ECOLI]] Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Involved in the integration of FimH in the fimbriae.
+
[https://www.uniprot.org/uniprot/FIMG_ECOLI FIMG_ECOLI] Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Involved in the integration of FimH in the fimbriae.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bf/3bfw_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bf/3bfw_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 34: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ecow3]]
+
[[Category: Escherichia coli]]
-
[[Category: Capitani, G]]
+
[[Category: Escherichia coli str. K-12 substr. W3110]]
-
[[Category: Eidam, O]]
+
[[Category: Large Structures]]
-
[[Category: Grutter, M G]]
+
[[Category: Capitani G]]
-
[[Category: Cell adhesion]]
+
[[Category: Eidam O]]
-
[[Category: Cell projection]]
+
[[Category: Grutter MG]]
-
[[Category: Donor strand exchange]]
+
-
[[Category: Fimbrium]]
+
-
[[Category: Incomplete ig-like fold]]
+
-
[[Category: Structural protein-structural protein complex]]
+

Current revision

Crystal structure of truncated FimG (FimGt) in complex with the donor strand peptide of FimF (DSF)

PDB ID 3bfw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools