This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6dnr
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==PRPP Riboswitch bound to PRPP, ligand-free structure== | ==PRPP Riboswitch bound to PRPP, ligand-free structure== | ||
| - | <StructureSection load='6dnr' size='340' side='right' caption='[[6dnr]], [[Resolution|resolution]] 2.90Å' scene=''> | + | <StructureSection load='6dnr' size='340' side='right'caption='[[6dnr]], [[Resolution|resolution]] 2.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6dnr]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DNR OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6dnr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Syntrophothermus_lipocalidus_DSM_12680 Syntrophothermus lipocalidus DSM 12680]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DNR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DNR FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.896Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dnr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dnr OCA], [https://pdbe.org/6dnr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dnr RCSB], [https://www.ebi.ac.uk/pdbsum/6dnr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dnr ProSAT]</span></td></tr> |
</table> | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 17: | Line 17: | ||
</div> | </div> | ||
<div class="pdbe-citations 6dnr" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 6dnr" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Riboswitch 3D structures|Riboswitch 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Syntrophothermus lipocalidus DSM 12680]] |
| - | [[Category: | + | [[Category: Peselis A]] |
| - | [[Category: | + | [[Category: Serganov A]] |
| - | + | ||
| - | + | ||
Current revision
PRPP Riboswitch bound to PRPP, ligand-free structure
| |||||||||||
