2r1f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:36, 30 October 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli==
==Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli==
-
<StructureSection load='2r1f' size='340' side='right' caption='[[2r1f]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
+
<StructureSection load='2r1f' size='340' side='right'caption='[[2r1f]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2r1f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2R1F FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R1F FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.21&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yceG, b1097, JW1083 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1f OCA], [https://pdbe.org/2r1f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r1f RCSB], [https://www.ebi.ac.uk/pdbsum/2r1f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r1f ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2r1f TOPSAN]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2r1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1f OCA], [http://pdbe.org/2r1f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2r1f RCSB], [http://www.ebi.ac.uk/pdbsum/2r1f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2r1f ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2r1f TOPSAN]</span></td></tr>
+
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 14: Line 13:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r1/2r1f_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r1/2r1f_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 21: Line 20:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ecoli]]
+
[[Category: Large Structures]]
-
[[Category: Almo, S C]]
+
[[Category: Almo SC]]
-
[[Category: Burley, S K]]
+
[[Category: Burley SK]]
-
[[Category: Gheyi, T]]
+
[[Category: Gheyi T]]
-
[[Category: Lau, C]]
+
[[Category: Lau C]]
-
[[Category: Maletic, M]]
+
[[Category: Maletic M]]
-
[[Category: Meyer, A J]]
+
[[Category: Meyer AJ]]
-
[[Category: Structural genomic]]
+
[[Category: Patskovsky Y]]
-
[[Category: Patskovsky, Y]]
+
[[Category: Ramagopal UA]]
-
[[Category: Ramagopal, U A]]
+
[[Category: Rutter M]]
-
[[Category: Rutter, M]]
+
[[Category: Sauder JM]]
-
[[Category: Sauder, J M]]
+
[[Category: Smith D]]
-
[[Category: Smith, D]]
+
[[Category: Toro R]]
-
[[Category: Toro, R]]
+
[[Category: Wasserman S]]
-
[[Category: Wasserman, S]]
+
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
+
-
[[Category: Pfam 02618]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli

PDB ID 2r1f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2r1f"
Personal tools