2vkp

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[[Image:2vkp.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of BTB domain from BTBD6==
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|PDB= 2vkp |SIZE=350|CAPTION= <scene name='initialview01'>2vkp</scene>, resolution 1.90&Aring;
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<StructureSection load='2vkp' size='340' side='right'caption='[[2vkp]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Mse+Binding+Site+For+Chain+A'>AC1</scene>, <scene name='pdbsite=AC2:Mse+Binding+Site+For+Chain+A'>AC2</scene>, <scene name='pdbsite=AC3:Mse+Binding+Site+For+Chain+A'>AC3</scene>, <scene name='pdbsite=AC4:Mse+Binding+Site+For+Chain+A'>AC4</scene>, <scene name='pdbsite=AC5:Mse+Binding+Site+For+Chain+B'>AC5</scene>, <scene name='pdbsite=AC6:Mse+Binding+Site+For+Chain+B'>AC6</scene>, <scene name='pdbsite=AC7:Mse+Binding+Site+For+Chain+B'>AC7</scene>, <scene name='pdbsite=AC8:Mse+Binding+Site+For+Chain+B'>AC8</scene>, <scene name='pdbsite=AC9:K+Binding+Site+For+Chain+B'>AC9</scene> and <scene name='pdbsite=BC1:Edo+Binding+Site+For+Chain+B'>BC1</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
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<table><tr><td colspan='2'>[[2vkp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VKP FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vkp OCA], [https://pdbe.org/2vkp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vkp RCSB], [https://www.ebi.ac.uk/pdbsum/2vkp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vkp ProSAT]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vkp OCA], [http://www.ebi.ac.uk/pdbsum/2vkp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2vkp RCSB]</span>
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== Evolutionary Conservation ==
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}}
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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'''CRYSTAL STRUCTURE OF BTB DOMAIN FROM BTBD6'''
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vk/2vkp_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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==About this Structure==
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<text>to colour the structure by Evolutionary Conservation</text>
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2VKP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VKP OCA].
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vkp ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Arrowsmith, C H.]]
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[[Category: Arrowsmith CH]]
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[[Category: Bunkoczi, G.]]
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[[Category: Bunkoczi G]]
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[[Category: Cooper, C D.O.]]
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[[Category: Cooper CDO]]
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[[Category: Delft, F Von.]]
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[[Category: Edwards A]]
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[[Category: Edwards, A.]]
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[[Category: Elkins JM]]
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[[Category: Elkins, J M.]]
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[[Category: Filippakopoulos P]]
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[[Category: Filippakopoulos, P.]]
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[[Category: Gileadi O]]
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[[Category: Gileadi, O.]]
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[[Category: Knapp S]]
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[[Category: Knapp, S.]]
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[[Category: Pike ACW]]
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[[Category: Pike, A C.W.]]
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[[Category: Salah E]]
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[[Category: Salah, E.]]
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[[Category: Weigelt J]]
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[[Category: Weigelt, J.]]
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[[Category: Von Delft F]]
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[[Category: protein-binding]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:13:20 2008''
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Current revision

Crystal structure of BTB domain from BTBD6

PDB ID 2vkp

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OCA

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