2vml

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[[Image:2vml.jpg|left|200px]]
 
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{{Structure
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==The monoclinic structure of phycocyanin from Gloeobacter violaceus==
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|PDB= 2vml |SIZE=350|CAPTION= <scene name='initialview01'>2vml</scene>, resolution 2.400&Aring;
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<StructureSection load='2vml' size='340' side='right'caption='[[2vml]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Cyc+Binding+Site+For+Residue+A+1082'>AC1</scene>, <scene name='pdbsite=AC2:Cyc+Binding+Site+For+Residue+B+1082'>AC2</scene>, <scene name='pdbsite=AC3:Cyc+Binding+Site+For+Residue+B+1153'>AC3</scene>, <scene name='pdbsite=AC4:Cyc+Binding+Site+For+Residue+C+1082'>AC4</scene>, <scene name='pdbsite=AC5:Cyc+Binding+Site+For+Residue+D+1082'>AC5</scene>, <scene name='pdbsite=AC6:Cyc+Binding+Site+For+Residue+D+1153'>AC6</scene>, <scene name='pdbsite=AC7:Cyc+Binding+Site+For+Residue+E+1082'>AC7</scene>, <scene name='pdbsite=AC8:Cyc+Binding+Site+For+Residue+F+1082'>AC8</scene>, <scene name='pdbsite=AC9:Cyc+Binding+Site+For+Residue+F+1153'>AC9</scene>, <scene name='pdbsite=BC1:Cyc+Binding+Site+For+Residue+G+1082'>BC1</scene>, <scene name='pdbsite=BC2:Cyc+Binding+Site+For+Residue+H+1082'>BC2</scene>, <scene name='pdbsite=BC3:Cyc+Binding+Site+For+Residue+H+1153'>BC3</scene>, <scene name='pdbsite=BC4:Cyc+Binding+Site+For+Residue+I+1082'>BC4</scene>, <scene name='pdbsite=BC5:Cyc+Binding+Site+For+Residue+J+1082'>BC5</scene>, <scene name='pdbsite=BC6:Cyc+Binding+Site+For+Residue+J+1153'>BC6</scene>, <scene name='pdbsite=BC7:Cyc+Binding+Site+For+Residue+K+1082'>BC7</scene>, <scene name='pdbsite=BC8:Cyc+Binding+Site+For+Residue+L+1082'>BC8</scene> and <scene name='pdbsite=BC9:Cyc+Binding+Site+For+Residue+L+1153'>BC9</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene>
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<table><tr><td colspan='2'>[[2vml]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VML OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VML FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00502 Phycobilisome]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vml FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vml OCA], [https://pdbe.org/2vml PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vml RCSB], [https://www.ebi.ac.uk/pdbsum/2vml PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vml ProSAT]</span></td></tr>
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|RELATEDENTRY=[[2vjr|2VJR]]
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vml FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vml OCA], [http://www.ebi.ac.uk/pdbsum/2vml PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2vml RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/Q7M7F7_GLOVI Q7M7F7_GLOVI]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vm/2vml_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vml ConSurf].
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<div style="clear:both"></div>
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'''THE MONOCLINIC STRUCTURE OF PHYCOCYANIN FROM GLOEOBACTER VIOLACEUS'''
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==See Also==
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*[[Phycocyanin|Phycocyanin]]
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__TOC__
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==About this Structure==
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</StructureSection>
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2VML is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Gloeobacter_violaceus Gloeobacter violaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VML OCA].
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[[Category: Gloeobacter violaceus]]
[[Category: Gloeobacter violaceus]]
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[[Category: Protein complex]]
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[[Category: Large Structures]]
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[[Category: Barber, J.]]
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[[Category: Barber J]]
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[[Category: Benson, S.]]
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[[Category: Benson S]]
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[[Category: Murray, J W.]]
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[[Category: Murray JW]]
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[[Category: bile pigment]]
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[[Category: chromophore]]
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[[Category: electron transport]]
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[[Category: light-harvesting]]
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[[Category: photosynthesis]]
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[[Category: phycobilisome]]
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[[Category: transport]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:13:38 2008''
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Current revision

The monoclinic structure of phycocyanin from Gloeobacter violaceus

PDB ID 2vml

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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