2ys0

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[[Image:2ys0.gif|left|200px]]
 
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{{Structure
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==Solution structure of the Somatomedin B domain of human Ectonucleotide pyrophosphatase/phosphodiesterase family member==
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|PDB= 2ys0 |SIZE=350|CAPTION= <scene name='initialview01'>2ys0</scene>
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<StructureSection load='2ys0' size='340' side='right'caption='[[2ys0]]' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND=
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<table><tr><td colspan='2'>[[2ys0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YS0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YS0 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
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|GENE= ENPP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ys0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ys0 OCA], [https://pdbe.org/2ys0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ys0 RCSB], [https://www.ebi.ac.uk/pdbsum/2ys0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ys0 ProSAT], [https://www.topsan.org/Proteins/RSGI/2ys0 TOPSAN]</span></td></tr>
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|DOMAIN=
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</table>
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|RELATEDENTRY=
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== Disease ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ys0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ys0 OCA], [http://www.ebi.ac.uk/pdbsum/2ys0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ys0 RCSB]</span>
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[https://www.uniprot.org/uniprot/ENPP1_HUMAN ENPP1_HUMAN] Defects in ENPP1 are a cause of increased susceptibility for ossification of the posterior longitudinal ligament of the spine (OPLL) [MIM:[https://omim.org/entry/602475 602475]. OPLL is a common form of human myelopathy with a prevalence of as much as 4% in a variety of ethnic groups.<ref>PMID:10453738</ref> Defects in ENPP1 are the cause of arterial calcification of infancy, generalized, type 1 (GACI1) [MIM:[https://omim.org/entry/208000 208000]. A severe autosomal recessive disorder characterized by calcification of the internal elastic lamina of muscular arteries and stenosis due to myointimal proliferation. The disorder is often fatal within the first 6 months of life because of myocardial ischemia resulting in refractory heart failure.<ref>PMID:12881724</ref> <ref>PMID:15940697</ref> <ref>PMID:15605415</ref> <ref>PMID:22209248</ref> Defects in ENPP1 are associated with obesity, glucose intolerance, and type II diabetes non-insulin dependent (NIDDM) [MIM:[https://omim.org/entry/125853 125853].<ref>PMID:16186408</ref> Defects in ENPP1 are the cause of rickets hypophosphatemic autosomal recessive type 2 (ARHR2) [MIM:[https://omim.org/entry/613312 613312]. ARHR2 is a hereditary form of hypophosphatemic rickets, a disorder of proximal renal tubule function that causes phosphate loss, hypophosphatemia and skeletal deformities, including rickets and osteomalacia unresponsive to vitamin D. Symptoms are bone pain, fractures and growth abnormalities.<ref>PMID:20137773</ref> <ref>PMID:20137772</ref>
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}}
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== Function ==
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[https://www.uniprot.org/uniprot/ENPP1_HUMAN ENPP1_HUMAN] Involved primarily in ATP hydrolysis at the plasma membrane. Plays a role in regulating pyrophosphate levels, and functions in bone mineralization and soft tissue calcification. In vitro, has a broad specificity, hydrolyzing other nucleoside 5' triphosphates such as GTP, CTP, TTP and UTP to their corresponding monophosphates with release of pyrophosphate and diadenosine polyphosphates, and also 3',5'-cAMP to AMP. May also be involved in the regulation of the availability of nucleotide sugars in the endoplasmic reticulum and Golgi, and the regulation of purinergic signaling. Appears to modulate insulin sensitivity.<ref>PMID:10615944</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/2ys0_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ys0 ConSurf].
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<div style="clear:both"></div>
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'''Solution structure of the Somatomedin B domain of human Ectonucleotide pyrophosphatase/phosphodiesterase family member'''
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==See Also==
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*[[Ectonucleotide pyrophosphatase/phosphodiesterase 3D structures|Ectonucleotide pyrophosphatase/phosphodiesterase 3D structures]]
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== References ==
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==Disease==
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<references/>
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Known disease associated with this structure: Arterial calcification, generalized, of infancy OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=173335 173335]], Ossification of posterior longitudinal ligament of spine OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=173335 173335]], Diabetes mellitus, non-insulin-dependent, susceptibility to OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=173335 173335]], Obesity, susceptibility to OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=173335 173335]]
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__TOC__
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</StructureSection>
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==About this Structure==
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2YS0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YS0 OCA].
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Abe, H.]]
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[[Category: Abe H]]
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[[Category: Inoue, M.]]
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[[Category: Inoue M]]
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[[Category: Kigawa, T.]]
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[[Category: Kigawa T]]
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[[Category: Koshiba, S.]]
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[[Category: Koshiba S]]
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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[[Category: Sasagawa A]]
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[[Category: Sasagawa, A.]]
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[[Category: Tochio N]]
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[[Category: Tochio, N.]]
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[[Category: Tomizawa T]]
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[[Category: Tomizawa, T.]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S.]]
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[[Category: e-npp 1]]
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[[Category: hydrolase]]
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[[Category: national project on protein structural and functional analyse]]
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[[Category: nppsfa]]
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[[Category: phosphodiesterase i/nucleotide pyrophosphatase 1]]
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[[Category: plasma-cell membrane glycoprotein pc-1]]
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[[Category: riken structural genomics/proteomics initiative]]
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[[Category: rsgi]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:14:48 2008''
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Current revision

Solution structure of the Somatomedin B domain of human Ectonucleotide pyrophosphatase/phosphodiesterase family member

PDB ID 2ys0

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