Transcription factor tau
From Proteopedia
(Difference between revisions)
(New page: <StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''> == Function == '''Transcription factor tau''' or '''TFIIIC''' is required for transc...) |
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| - | + | <StructureSection load='4bji' size='340' side='right' caption='Se-Met structure of TFIIIC subunit SCF1 DNA-binding domain (PDB code [[4bji]])' scene='80/801767/Cv/1'> | |
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== Function == | == Function == | ||
| - | '''Transcription factor tau''' or '''TFIIIC''' is required for transcription of tRNA and 5S RNA genes by RNA polymerase III<ref>PMID:17409385</ref>. TFIIIC conserved complex is involved in the mechanism controlling general genome organization<ref>PMID:16751097</ref>. | + | '''Transcription factor tau''' or '''TFIIIC''' is required for transcription of tRNA and 5S RNA genes by RNA polymerase III<ref>PMID:17409385</ref>. TFIIIC conserved complex is involved in the mechanism controlling general genome organization<ref>PMID:16751097</ref>. TFIIIC is a multisubunit protein which initiates transcription complex assembly on tRNA by binding to the internal box B promoter element of RNA polymerase III<ref>PMID:8127861</ref>. |
| - | == | + | == Structural highlights == |
| - | == | + | TFIIIC contains 6 subunits which are organized in 2 subcomplexes. Subcomplex A contains the 131 kDa, 95 kDa and 55kDa subunits while subcomplex B contains 138 kDa, 91 kDa and 60 kDa subunits<ref>PMID:32999288</ref>. The structure of TFIIIC subunit SCF1 DNA-binding domain contains a <scene name='80/801767/Cv/4'>winged-helix domain</scene> (colored in green) and displays a <scene name='80/801767/Cv/5'>basic patch which is the possible DNA-binding surface</scene> (colored in royalblue)<ref>PMID:23921640</ref>. |
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</StructureSection> | </StructureSection> | ||
| - | ==3D structures of transcription factor tau== | + | ==3D structures of transcription factor tau or TFIIIC== |
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
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[[4bjj]] - fyTFIIIC subunits SFC1 + SFC7 dimerization domain - fission yeast<br /> | [[4bjj]] - fyTFIIIC subunits SFC1 + SFC7 dimerization domain - fission yeast<br /> | ||
[[4bji]] - fyTFIIIC subunit SFC1 DNA-binding domain <br /> | [[4bji]] - fyTFIIIC subunit SFC1 DNA-binding domain <br /> | ||
| - | [[2yn0]] - yTFIIIC subunit SFC7 histidine phosphatase domain - yeast<br /> | + | [[2yn0]] - yTFIIIC 55 kDa subunit SFC7 histidine phosphatase domain - yeast<br /> |
| - | [[5aem]], [[5aio]] - yTFIIIC subunit SFC4 N-terminal TPR array <br /> | + | [[5aem]], [[5aio]] - yTFIIIC 131 kDa subunit SFC4 N-terminal TPR array <br /> |
| - | [[5aim]] - yTFIIIC subunit SFC3 central EWH domain <br /> | + | [[5aim]] - yTFIIIC 138 kDa subunit SFC3 central EWH domain <br /> |
| + | [[6yj6]] - yTFIIIC 131 kDa + 95 kDa + 55 kDa subunits – Cryo EM <br /> | ||
| + | [[8ffz]] - yTFIIIC 138 kDa + 131 kDa + 95 kDa + 60 kDa + 55kDa subunits + TFIIIA + TFIIIB 70 kDa + DNA – Cryo EM <br /> | ||
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== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
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3D structures of transcription factor tau or TFIIIC
Updated on 28-December-2023
Domains: dimerization 1-110; histidine phosphatase 1-272; DNA-binding 186-396; N-terminal TPR array 123-566; central EWH 546-641
4bjj - fyTFIIIC subunits SFC1 + SFC7 dimerization domain - fission yeast
4bji - fyTFIIIC subunit SFC1 DNA-binding domain
2yn0 - yTFIIIC 55 kDa subunit SFC7 histidine phosphatase domain - yeast
5aem, 5aio - yTFIIIC 131 kDa subunit SFC4 N-terminal TPR array
5aim - yTFIIIC 138 kDa subunit SFC3 central EWH domain
6yj6 - yTFIIIC 131 kDa + 95 kDa + 55 kDa subunits – Cryo EM
8ffz - yTFIIIC 138 kDa + 131 kDa + 95 kDa + 60 kDa + 55kDa subunits + TFIIIA + TFIIIB 70 kDa + DNA – Cryo EM
References
- ↑ Dumay-Odelot H, Marck C, Durrieu-Gaillard S, Lefebvre O, Jourdain S, Prochazkova M, Pflieger A, Teichmann M. Identification, molecular cloning, and characterization of the sixth subunit of human transcription factor TFIIIC. J Biol Chem. 2007 Jun 8;282(23):17179-89. doi: 10.1074/jbc.M611542200. Epub 2007 , Apr 4. PMID:17409385 doi:http://dx.doi.org/10.1074/jbc.M611542200
- ↑ Noma K, Cam HP, Maraia RJ, Grewal SI. A role for TFIIIC transcription factor complex in genome organization. Cell. 2006 Jun 2;125(5):859-72. PMID:16751097 doi:10.1016/j.cell.2006.04.028
- ↑ L'Etoile ND, Fahnestock ML, Shen Y, Aebersold R, Berk AJ. Human transcription factor IIIC box B binding subunit. Proc Natl Acad Sci U S A. 1994 Mar 1;91(5):1652-6. PMID:8127861
- ↑ Vorlander MK, Jungblut A, Karius K, Baudin F, Grotsch H, Kosinski J, Muller CW. Structure of the TFIIIC subcomplex tauA provides insights into RNA polymerase III pre-initiation complex formation. Nat Commun. 2020 Sep 30;11(1):4905. doi: 10.1038/s41467-020-18707-y. PMID:32999288 doi:http://dx.doi.org/10.1038/s41467-020-18707-y
- ↑ Taylor NM, Baudin F, von Scheven G, Muller CW. RNA polymerase III-specific general transcription factor IIIC contains a heterodimer resembling TFIIF Rap30/Rap74. Nucleic Acids Res. 2013 Aug 5. PMID:23921640 doi:10.1093/nar/gkt664
