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2yy3

From Proteopedia

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[[Image:2yy3.gif|left|200px]]
 
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{{Structure
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==Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii==
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|PDB= 2yy3 |SIZE=350|CAPTION= <scene name='initialview01'>2yy3</scene>, resolution 2.50&Aring;
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<StructureSection load='2yy3' size='340' side='right'caption='[[2yy3]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
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<table><tr><td colspan='2'>[[2yy3]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YY3 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YY3 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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|GENE=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2yy3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yy3 OCA], [http://pdbe.org/2yy3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yy3 RCSB], [http://www.ebi.ac.uk/pdbsum/2yy3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yy3 ProSAT], [http://www.topsan.org/Proteins/RSGI/2yy3 TOPSAN]</span></td></tr>
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|DOMAIN=
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</table>
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|RELATEDENTRY=
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== Function ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yy3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yy3 OCA], [http://www.ebi.ac.uk/pdbsum/2yy3 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2yy3 RCSB]</span>
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[[http://www.uniprot.org/uniprot/EF1B_PYRHO EF1B_PYRHO]] Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA (By similarity).
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/2yy3_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yy3 ConSurf].
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<div style="clear:both"></div>
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'''Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii'''
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==See Also==
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*[[Elongation factor 3D structures|Elongation factor 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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2YY3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YY3 OCA].
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[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]
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[[Category: Single protein]]
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[[Category: Bessho, Y]]
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[[Category: Bessho, Y.]]
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[[Category: Ishii, T]]
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[[Category: Ishii, T.]]
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[[Category: Structural genomic]]
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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[[Category: Yokoyama, S]]
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[[Category: Yokoyama, S.]]
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[[Category: Elongation factor]]
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[[Category: elongation factor]]
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[[Category: National project on protein structural and functional analyse]]
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[[Category: national project on protein structural and functional analyse]]
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[[Category: Nppsfa]]
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[[Category: nppsfa]]
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[[Category: Rsgi]]
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[[Category: riken structural genomics/proteomics initiative]]
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[[Category: Translation]]
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[[Category: rsgi]]
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[[Category: structural genomic]]
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[[Category: translation]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:16:29 2008''
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Current revision

Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii

PDB ID 2yy3

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