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2yys

From Proteopedia

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[[Image:2yys.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8==
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|PDB= 2yys |SIZE=350|CAPTION= <scene name='initialview01'>2yys</scene>, resolution 2.20&Aring;
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<StructureSection load='2yys' size='340' side='right'caption='[[2yys]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Gol+Binding+Site+For+Residue+A+500'>AC1</scene>, <scene name='pdbsite=AC2:Gol+Binding+Site+For+Residue+A+501'>AC2</scene>, <scene name='pdbsite=AC3:Gol+Binding+Site+For+Residue+A+502'>AC3</scene>, <scene name='pdbsite=AC4:Gol+Binding+Site+For+Residue+B+1500'>AC4</scene>, <scene name='pdbsite=AC5:Gol+Binding+Site+For+Residue+B+1501'>AC5</scene> and <scene name='pdbsite=AC6:Gol+Binding+Site+For+Residue+B+1502'>AC6</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
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<table><tr><td colspan='2'>[[2yys]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YYS FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yys OCA], [https://pdbe.org/2yys PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yys RCSB], [https://www.ebi.ac.uk/pdbsum/2yys PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yys ProSAT]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yys OCA], [http://www.ebi.ac.uk/pdbsum/2yys PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2yys RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/Q5SHC1_THET8 Q5SHC1_THET8]
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== Evolutionary Conservation ==
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'''Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8'''
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/2yys_consurf.spt"</scriptWhenChecked>
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2YYS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YYS OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==Reference==
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</jmolCheckbox>
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Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8., Okai M, Miyauchi Y, Ebihara A, Lee WC, Nagata K, Tanokura M, Proteins. 2008 Mar;70(4):1646-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18175319 18175319]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yys ConSurf].
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[[Category: Single protein]]
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<div style="clear:both"></div>
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[[Category: Thermus thermophilus]]
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__TOC__
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[[Category: Ebihara, A.]]
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</StructureSection>
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[[Category: Lee, W C.]]
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[[Category: Large Structures]]
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[[Category: Miyauchi, Y.]]
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[[Category: Thermus thermophilus HB8]]
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[[Category: Nagata, K.]]
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[[Category: Ebihara A]]
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[[Category: Okai, M.]]
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[[Category: Lee WC]]
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[[Category: Tanokura, M.]]
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[[Category: Miyauchi Y]]
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[[Category: crystal structure]]
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[[Category: Nagata K]]
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[[Category: proline iminopeptidase-related protein]]
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[[Category: Okai M]]
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[[Category: structural genomic]]
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[[Category: Tanokura M]]
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[[Category: ttha1809]]
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[[Category: unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:16:40 2008''
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Current revision

Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8

PDB ID 2yys

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