6n3c

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(New page: '''Unreleased structure''' The entry 6n3c is ON HOLD until Paper Publication Authors: Cao, Q., Boyer, D.R., Sawaya, M.R., Eisenberg, D.S. Description: SegB, conformation of TDP-43 low ...)
Current revision (09:20, 20 March 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6n3c is ON HOLD until Paper Publication
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==SegB, conformation of TDP-43 low complexity domain segment A==
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<SX load='6n3c' size='340' side='right' viewer='molstar' caption='[[6n3c]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
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Authors: Cao, Q., Boyer, D.R., Sawaya, M.R., Eisenberg, D.S.
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6n3c]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6N3C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6N3C FirstGlance]. <br>
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Description: SegB, conformation of TDP-43 low complexity domain segment A
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
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[[Category: Unreleased Structures]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6n3c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6n3c OCA], [https://pdbe.org/6n3c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6n3c RCSB], [https://www.ebi.ac.uk/pdbsum/6n3c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6n3c ProSAT]</span></td></tr>
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[[Category: Cao, Q]]
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</table>
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[[Category: Sawaya, M.R]]
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== Disease ==
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[[Category: Eisenberg, D.S]]
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[https://www.uniprot.org/uniprot/TADBP_HUMAN TADBP_HUMAN] Defects in TARDBP are the cause of amyotrophic lateral sclerosis type 10 (ALS10) [MIM:[https://omim.org/entry/612069 612069]. ALS is a neurodegenerative disorder affecting upper and lower motor neurons and resulting in fatal paralysis. Sensory abnormalities are absent. Death usually occurs within 2 to 5 years. The etiology of ALS is likely to be multifactorial, involving both genetic and environmental factors. The disease is inherited in 5-10% of the cases.<ref>PMID:20740007</ref> <ref>PMID:18288693</ref> <ref>PMID:18438952</ref> <ref>PMID:18396105</ref> <ref>PMID:18372902</ref> <ref>PMID:18309045</ref> <ref>PMID:19350673</ref> <ref>PMID:19224587</ref> <ref>PMID:19655382</ref> <ref>PMID:19695877</ref> <ref>PMID:21220647</ref> <ref>PMID:21418058</ref> <ref>PMID:22456481</ref>
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[[Category: Boyer, D.R]]
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== Function ==
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[https://www.uniprot.org/uniprot/TADBP_HUMAN TADBP_HUMAN] DNA and RNA-binding protein which regulates transcription and splicing. Involved in the regulation of CFTR splicing. It promotes CFTR exon 9 skipping by binding to the UG repeated motifs in the polymorphic region near the 3'-splice site of this exon. The resulting aberrant splicing is associated with pathological features typical of cystic fibrosis. May also be involved in microRNA biogenesis, apoptosis and cell division. Can repress HIV-1 transcription by binding to the HIV-1 long terminal repeat. Stabilizes the low molecular weight neurofilament (NFL) mRNA through a direct interaction with the 3' UTR.<ref>PMID:17481916</ref> <ref>PMID:11285240</ref>
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== References ==
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<references/>
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__TOC__
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</SX>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Boyer DR]]
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[[Category: Cao Q]]
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[[Category: Eisenberg DS]]
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[[Category: Sawaya MR]]

Current revision

SegB, conformation of TDP-43 low complexity domain segment A

6n3c, resolution 3.30Å

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