2c1c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:48, 23 October 2024) (edit) (undo)
 
(20 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2c1c.gif|left|200px]]<br />
 
-
<applet load="2c1c" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2c1c, resolution 2.30&Aring;" />
 
-
'''STRUCTURAL BASIS OF THE RESISTANCE OF AN INSECT CARBOXYPEPTIDASE TO PLANT PROTEASE INHIBITORS'''<br />
 
-
==Overview==
+
==Structural basis of the resistance of an insect carboxypeptidase to plant protease inhibitors==
-
Corn earworm (Helicoverpa zea), also called tomato fruitworm, is a common, pest of many Solanaceous plants. This insect is known to adapt to the, ingestion of plant serine protease inhibitors by using digestive proteases, that are insensitive to inhibition. We have now identified a B-type, carboxypeptidase of H. zea (CPBHz) insensitive to potato carboxypeptidase, inhibitor (PCI) in corn earworm. To elucidate the structural features, leading to the adaptation of the insect enzyme, the crystal structure of, the recombinant CPBHz protein was determined by x-ray diffraction. CPBHz, is a member of the A/B subfamily of metallocarboxypeptidases, which, displays the characteristic metallocarboxypeptidase alpha/beta-hydrolase, fold, and does not differ essentially from the previously described, Helicoverpa armigera CPA, which is very sensitive to PCI. The data provide, structural insight into several functional properties of CPBHz. The high, selectivity shown by CPBHz for C-terminal lysine residues is due to, residue changes in the S1' substrate specificity pocket that render it, unable to accommodate the side chain of an arginine. The insensitivity of, CPBHz to plant inhibitors is explained by the exceptional positioning of, two of the main regions that stabilize other carboxypeptidase-PCI, complexes, the beta8-alpha9 loop, and alpha7 together with the, alpha7-alpha8 loop. The rearrangement of these two regions leads to a, displacement of the active-site entrance that impairs the proper, interaction with PCI. This report explains a crystal structure of an, insect protease and its adaptation to defensive plant protease inhibitors.
+
<StructureSection load='2c1c' size='340' side='right'caption='[[2c1c]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2c1c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicoverpa_zea Helicoverpa zea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C1C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C1C FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=Y1:YTTRIUM+ION'>Y1</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c1c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c1c OCA], [https://pdbe.org/2c1c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c1c RCSB], [https://www.ebi.ac.uk/pdbsum/2c1c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c1c ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CBPB_HELZE CBPB_HELZE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c1/2c1c_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2c1c ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Corn earworm (Helicoverpa zea), also called tomato fruitworm, is a common pest of many Solanaceous plants. This insect is known to adapt to the ingestion of plant serine protease inhibitors by using digestive proteases that are insensitive to inhibition. We have now identified a B-type carboxypeptidase of H. zea (CPBHz) insensitive to potato carboxypeptidase inhibitor (PCI) in corn earworm. To elucidate the structural features leading to the adaptation of the insect enzyme, the crystal structure of the recombinant CPBHz protein was determined by x-ray diffraction. CPBHz is a member of the A/B subfamily of metallocarboxypeptidases, which displays the characteristic metallocarboxypeptidase alpha/beta-hydrolase fold, and does not differ essentially from the previously described Helicoverpa armigera CPA, which is very sensitive to PCI. The data provide structural insight into several functional properties of CPBHz. The high selectivity shown by CPBHz for C-terminal lysine residues is due to residue changes in the S1' substrate specificity pocket that render it unable to accommodate the side chain of an arginine. The insensitivity of CPBHz to plant inhibitors is explained by the exceptional positioning of two of the main regions that stabilize other carboxypeptidase-PCI complexes, the beta8-alpha9 loop, and alpha7 together with the alpha7-alpha8 loop. The rearrangement of these two regions leads to a displacement of the active-site entrance that impairs the proper interaction with PCI. This report explains a crystal structure of an insect protease and its adaptation to defensive plant protease inhibitors.
-
==About this Structure==
+
Structural basis of the resistance of an insect carboxypeptidase to plant protease inhibitors.,Bayes A, Comellas-Bigler M, Rodriguez de la Vega M, Maskos K, Bode W, Aviles FX, Jongsma MA, Beekwilder J, Vendrell J Proc Natl Acad Sci U S A. 2005 Nov 15;102(46):16602-7. Epub 2005 Oct 31. PMID:16260742<ref>PMID:16260742</ref>
-
2C1C is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Helicoverpa_zea Helicoverpa zea] with ZN and Y1 as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Carboxypeptidase_B Carboxypeptidase B], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.17.2 3.4.17.2] Structure known Active Site: AC1. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2C1C OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
Structural basis of the resistance of an insect carboxypeptidase to plant protease inhibitors., Bayes A, Comellas-Bigler M, Rodriguez de la Vega M, Maskos K, Bode W, Aviles FX, Jongsma MA, Beekwilder J, Vendrell J, Proc Natl Acad Sci U S A. 2005 Nov 15;102(46):16602-7. Epub 2005 Oct 31. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16260742 16260742]
+
</div>
-
[[Category: Carboxypeptidase B]]
+
<div class="pdbe-citations 2c1c" style="background-color:#fffaf0;"></div>
-
[[Category: Helicoverpa zea]]
+
-
[[Category: Single protein]]
+
-
[[Category: Aviles, F.X.]]
+
-
[[Category: Bayes, A.]]
+
-
[[Category: Beekwilder, J.]]
+
-
[[Category: Bode, W.]]
+
-
[[Category: Comellas-Bigler, M.]]
+
-
[[Category: Jongsma, M.A.]]
+
-
[[Category: Maskos, K.]]
+
-
[[Category: Vega, M.Rodriguez.De.La.]]
+
-
[[Category: Vendrell, J.]]
+
-
[[Category: Y1]]
+
-
[[Category: ZN]]
+
-
[[Category: carboxypeptidase]]
+
-
[[Category: helicoverpa zea]]
+
-
[[Category: hydrolase]]
+
-
[[Category: insect]]
+
-
[[Category: insensitive]]
+
-
[[Category: metalloprotease]]
+
-
[[Category: plant inhibitors]]
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 5 17:55:28 2007''
+
==See Also==
 +
*[[Carboxypeptidase 3D structures|Carboxypeptidase 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Helicoverpa zea]]
 +
[[Category: Large Structures]]
 +
[[Category: Aviles FX]]
 +
[[Category: Bayes A]]
 +
[[Category: Beekwilder J]]
 +
[[Category: Bode W]]
 +
[[Category: Comellas-Bigler M]]
 +
[[Category: Jongsma MA]]
 +
[[Category: Maskos K]]
 +
[[Category: Rodriguez de la Vega M]]
 +
[[Category: Vendrell J]]

Current revision

Structural basis of the resistance of an insect carboxypeptidase to plant protease inhibitors

PDB ID 2c1c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools