This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4y2n

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:54, 27 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Structure of CFA/I pili major subunit CfaB trimer==
==Structure of CFA/I pili major subunit CfaB trimer==
-
<StructureSection load='4y2n' size='340' side='right' caption='[[4y2n]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+
<StructureSection load='4y2n' size='340' side='right'caption='[[4y2n]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4y2n]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoh1 Ecoh1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y2N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y2N FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4y2n]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_ETEC_H10407 Escherichia coli ETEC H10407]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y2N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Y2N FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4y2l|4y2l]], [[4y2o|4y2o]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cfaB, ETEC_p948_0400 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=316401 ECOH1])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4y2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y2n OCA], [https://pdbe.org/4y2n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4y2n RCSB], [https://www.ebi.ac.uk/pdbsum/4y2n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4y2n ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4y2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y2n OCA], [http://pdbe.org/4y2n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4y2n RCSB], [http://www.ebi.ac.uk/pdbsum/4y2n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4y2n ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/FMC1_ECOH1 FMC1_ECOH1]] Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs.
+
[https://www.uniprot.org/uniprot/FMC1_ECOH1 FMC1_ECOH1] Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 22:
==See Also==
==See Also==
*[[Colonization factor antigen|Colonization factor antigen]]
*[[Colonization factor antigen|Colonization factor antigen]]
-
*[[Pilin|Pilin]]
+
*[[Pilin 3D structures|Pilin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ecoh1]]
+
[[Category: Escherichia coli ETEC H10407]]
-
[[Category: Bao, R]]
+
[[Category: Large Structures]]
-
[[Category: Xia, D]]
+
[[Category: Bao R]]
-
[[Category: Enterotoxigenic escherichia coli]]
+
[[Category: Xia D]]
-
[[Category: Fimbriae]]
+
-
[[Category: Major pilin]]
+
-
[[Category: Periplasmic chaperone]]
+
-
[[Category: Self-assembly]]
+
-
[[Category: Structural protein]]
+

Current revision

Structure of CFA/I pili major subunit CfaB trimer

PDB ID 4y2n

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools