2z3b

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[[Image:2z3b.jpg|left|200px]]
 
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{{Structure
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==Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus==
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|PDB= 2z3b |SIZE=350|CAPTION= <scene name='initialview01'>2z3b</scene>, resolution 2.50&Aring;
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<StructureSection load='2z3b' size='340' side='right'caption='[[2z3b]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Na+Binding+Site+For+Residue+A+1001'>AC1</scene>, <scene name='pdbsite=AC2:Na+Binding+Site+For+Residue+B+1002'>AC2</scene>, <scene name='pdbsite=AC3:Na+Binding+Site+For+Residue+C+1003'>AC3</scene>, <scene name='pdbsite=AC4:Na+Binding+Site+For+Residue+D+1004'>AC4</scene>, <scene name='pdbsite=AC5:Na+Binding+Site+For+Residue+E+1005'>AC5</scene>, <scene name='pdbsite=AC6:Na+Binding+Site+For+Residue+F+1006'>AC6</scene>, <scene name='pdbsite=AC7:Na+Binding+Site+For+Residue+G+1007'>AC7</scene>, <scene name='pdbsite=AC8:Na+Binding+Site+For+Residue+J+1008'>AC8</scene>, <scene name='pdbsite=AC9:Na+Binding+Site+For+Residue+I+1009'>AC9</scene>, <scene name='pdbsite=BC1:Na+Binding+Site+For+Residue+H+1010'>BC1</scene>, <scene name='pdbsite=BC2:Na+Binding+Site+For+Residue+K+1011'>BC2</scene> and <scene name='pdbsite=BC3:Na+Binding+Site+For+Residue+L+1012'>BC3</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>
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<table><tr><td colspan='2'>[[2z3b]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z3B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z3B FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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|GENE= CODW ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 Bacillus subtilis])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01913 protease_HslV]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z3b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z3b OCA], [https://pdbe.org/2z3b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z3b RCSB], [https://www.ebi.ac.uk/pdbsum/2z3b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z3b ProSAT]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2z3b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z3b OCA], [http://www.ebi.ac.uk/pdbsum/2z3b PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2z3b RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/CLPQ_BACSU CLPQ_BACSU] Protease subunit of a proteasome-like degradation complex.<ref>PMID:11179218</ref>
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== Evolutionary Conservation ==
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'''Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus'''
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z3/2z3b_consurf.spt"</scriptWhenChecked>
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2Z3B is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z3B OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==Reference==
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</jmolCheckbox>
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Crystal structure of Bacillus subtilis CodW, a noncanonical HslV-like peptidase with an impaired catalytic apparatus., Rho SH, Park HH, Kang GB, Im YJ, Kang MS, Lim BK, Seong IS, Seol J, Chung CH, Wang J, Eom SH, Proteins. 2007 Nov 2;71(2):1020-1026. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17979190 17979190]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z3b ConSurf].
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<div style="clear:both"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Chung, C H.]]
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[[Category: Chung CH]]
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[[Category: Eom, S H.]]
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[[Category: Eom SH]]
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[[Category: Kang, G B.]]
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[[Category: Kang GB]]
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[[Category: Kang, M S.]]
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[[Category: Kang MS]]
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[[Category: Lim, B K.]]
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[[Category: Lim BK]]
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[[Category: Lim, Y J.]]
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[[Category: Lim YJ]]
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[[Category: Park, H H.]]
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[[Category: Park HH]]
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[[Category: Rho, S H.]]
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[[Category: Rho SH]]
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[[Category: Seong, I S.]]
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[[Category: Seong IS]]
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[[Category: Wang, J.]]
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[[Category: Wang J]]
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[[Category: n-terminal nucleophile hydrolase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:18:05 2008''
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Current revision

Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus

PDB ID 2z3b

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