This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3eop
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
==Crystal Structure of the DUF55 domain of human thymocyte nuclear protein 1== | ==Crystal Structure of the DUF55 domain of human thymocyte nuclear protein 1== | ||
| - | <StructureSection load='3eop' size='340' side='right' caption='[[3eop]], [[Resolution|resolution]] 2.30Å' scene=''> | + | <StructureSection load='3eop' size='340' side='right'caption='[[3eop]], [[Resolution|resolution]] 2.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3eop]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3eop]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EOP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EOP FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eop FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eop OCA], [https://pdbe.org/3eop PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eop RCSB], [https://www.ebi.ac.uk/pdbsum/3eop PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eop ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/THYN1_HUMAN THYN1_HUMAN] Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 32: | Line 33: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Homo sapiens]] |
| - | [[Category: He | + | [[Category: Large Structures]] |
| - | [[Category: Hu | + | [[Category: He J]] |
| - | [[Category: Li | + | [[Category: Hu H]] |
| - | [[Category: Song | + | [[Category: Li L]] |
| - | [[Category: Sun | + | [[Category: Song A]] |
| - | [[Category: Tang | + | [[Category: Sun L]] |
| - | [[Category: Xu | + | [[Category: Tang L]] |
| - | [[Category: Yu | + | [[Category: Xu C]] |
| - | + | [[Category: Yu F]] | |
| - | + | ||
| - | + | ||
Current revision
Crystal Structure of the DUF55 domain of human thymocyte nuclear protein 1
| |||||||||||
Categories: Homo sapiens | Large Structures | He J | Hu H | Li L | Song A | Sun L | Tang L | Xu C | Yu F

