This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2zaw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:28, 1 November 2023) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2zaw.jpg|left|200px]]
 
-
{{Structure
+
==Crystal Structure of Ferric Cytochrome P450cam Reconstituted with 6-Methyl-6-depropionated Hemin==
-
|PDB= 2zaw |SIZE=350|CAPTION= <scene name='initialview01'>2zaw</scene>, resolution 1.55&Aring;
+
<StructureSection load='2zaw' size='340' side='right'caption='[[2zaw]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=6HE:6-METHY-6-DEPROPIONATEHEMIN'>6HE</scene>, <scene name='pdbligand=CAM:CAMPHOR'>CAM</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>
+
<table><tr><td colspan='2'>[[2zaw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZAW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZAW FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Camphor_5-monooxygenase Camphor 5-monooxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.15.1 1.14.15.1] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
|GENE= camC, cyp101 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=303 Pseudomonas putida])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6HE:6-METHY-6-DEPROPIONATEHEMIN'>6HE</scene>, <scene name='pdbligand=CAM:CAMPHOR'>CAM</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zaw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zaw OCA], [https://pdbe.org/2zaw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zaw RCSB], [https://www.ebi.ac.uk/pdbsum/2zaw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zaw ProSAT]</span></td></tr>
-
|RELATEDENTRY=[[2z97|2Z97]], [[2zax|2ZAX]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zaw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zaw OCA], [http://www.ebi.ac.uk/pdbsum/2zaw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2zaw RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/CPXA_PSEPU CPXA_PSEPU] Involved in a camphor oxidation system.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/za/2zaw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zaw ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal Structure of Ferric Cytochrome P450cam Reconstituted with 6-Methyl-6-depropionated Hemin'''
+
==See Also==
-
 
+
*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2ZAW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZAW OCA].
+
[[Category: Large Structures]]
-
 
+
-
==Reference==
+
-
Evaluation of the functional role of the heme-6-propionate side chain in cytochrome P450cam., Harada K, Sakurai K, Ikemura K, Ogura T, Hirota S, Shimada H, Hayashi T, J Am Chem Soc. 2008 Jan 16;130(2):432-3. Epub 2007 Dec 19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18088124 18088124]
+
-
[[Category: Camphor 5-monooxygenase]]
+
[[Category: Pseudomonas putida]]
[[Category: Pseudomonas putida]]
-
[[Category: Single protein]]
+
[[Category: Harada K]]
-
[[Category: Harada, K.]]
+
[[Category: Hayashi T]]
-
[[Category: Hayashi, T.]]
+
[[Category: Sakurai K]]
-
[[Category: Sakurai, K.]]
+
[[Category: Shimada H]]
-
[[Category: Shimada, H.]]
+
[[Category: Tsukihara T]]
-
[[Category: Tsukihara, T.]]
+
-
[[Category: camphor-hydroxylase]]
+
-
[[Category: heme]]
+
-
[[Category: iron]]
+
-
[[Category: membrane]]
+
-
[[Category: metal-binding]]
+
-
[[Category: monooxygenase]]
+
-
[[Category: oxidoreductase]]
+
-
[[Category: p450cam]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:20:03 2008''
+

Current revision

Crystal Structure of Ferric Cytochrome P450cam Reconstituted with 6-Methyl-6-depropionated Hemin

PDB ID 2zaw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2zaw"
Personal tools