3fwz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:49, 21 November 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of TrkA-N domain of inner membrane protein ybaL from Escherichia coli==
==Crystal structure of TrkA-N domain of inner membrane protein ybaL from Escherichia coli==
-
<StructureSection load='3fwz' size='340' side='right' caption='[[3fwz]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
+
<StructureSection load='3fwz' size='340' side='right'caption='[[3fwz]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3fwz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FWZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FWZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3fwz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FWZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FWZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b0478, Escherichia coli CFT073, JW0467, ybaL, ylaA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fwz OCA], [https://pdbe.org/3fwz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fwz RCSB], [https://www.ebi.ac.uk/pdbsum/3fwz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fwz ProSAT], [https://www.topsan.org/Proteins/MCSG/3fwz TOPSAN]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fwz OCA], [http://pdbe.org/3fwz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3fwz RCSB], [http://www.ebi.ac.uk/pdbsum/3fwz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3fwz ProSAT], [http://www.topsan.org/Proteins/MCSG/3fwz TOPSAN]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YBAL_ECOLI YBAL_ECOLI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fw/3fwz_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fw/3fwz_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ecoli]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Bigelow, L]]
+
[[Category: Large Structures]]
-
[[Category: Buck, K]]
+
[[Category: Bigelow L]]
-
[[Category: Chang, C]]
+
[[Category: Buck K]]
-
[[Category: Joachimiak, A]]
+
[[Category: Chang C]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Antiport]]
+
-
[[Category: Cell inner membrane]]
+
-
[[Category: Cell membrane]]
+
-
[[Category: E coli]]
+
-
[[Category: Ion transport]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Membrane]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Transmembrane]]
+
-
[[Category: Transport]]
+
-
[[Category: Trka-n domain]]
+
-
[[Category: Ybal]]
+

Current revision

Crystal structure of TrkA-N domain of inner membrane protein ybaL from Escherichia coli

PDB ID 3fwz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools