6ibw

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Current revision (07:15, 16 October 2019) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6ibw is ON HOLD until Paper Publication
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==Crh5 transglycosylase in complex with NAG==
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<StructureSection load='6ibw' size='340' side='right'caption='[[6ibw]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6ibw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspfu Aspfu]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=5ndl 5ndl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IBW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IBW FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6ibu|6ibu]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">crf1, AFUA_1G16190 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=330879 ASPFU])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ibw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ibw OCA], [http://pdbe.org/6ibw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ibw RCSB], [http://www.ebi.ac.uk/pdbsum/6ibw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ibw ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Fungal cell wall synthesis is achieved by a balance of glycosyltransferase, hydrolase and transglycosylase activities. Transglycosylases strengthen the cell wall by forming a rigid network of crosslinks through mechanisms that remain to be explored. Here we study the function of the Aspergillus fumigatus family of five Crh transglycosylases. Although crh genes are dispensable for cell viability, simultaneous deletion of all genes renders cells sensitive to cell wall interfering compounds. In vitro biochemical assays and localisation studies demonstrate that this family of enzymes functions redundantly as transglycosylases for both chitin-glucan and chitin-chitin cell wall crosslinks. To understand the molecular basis of this acceptor promiscuity, we solved the crystal structure of A. fumigatus Crh5 (AfCrh5) in complex with a chitooligosaccharide at the resolution of 2.8 A, revealing an extensive elongated binding cleft for the donor (-4 to -1) substrate and a short acceptor (+1 to +2) binding site. Together with mutagenesis, the structure suggests a "hydrolysis product assisted" molecular mechanism favouring transglycosylation over hydrolysis.
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Authors: Fang, W., Bartual, S.G., van Aalten, D.M.F.
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Mechanisms of redundancy and specificity of the Aspergillus fumigatus Crh transglycosylases.,Fang W, Sanz AB, Bartual SG, Wang B, Ferenbach AT, Farkas V, Hurtado-Guerrero R, Arroyo J, van Aalten DMF Nat Commun. 2019 Apr 10;10(1):1669. doi: 10.1038/s41467-019-09674-0. PMID:30971696<ref>PMID:30971696</ref>
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Description: Crh5 transglycosylase in complex with NAG
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Van Aalten, D.M.F]]
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<div class="pdbe-citations 6ibw" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Aspfu]]
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[[Category: Large Structures]]
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[[Category: Aalten, D M.F van]]
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[[Category: Bartual, S G]]
[[Category: Fang, W]]
[[Category: Fang, W]]
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[[Category: Bartual, S.G]]
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[[Category: Cell wall assembly]]
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[[Category: Cross-link]]
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[[Category: Gh16]]
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[[Category: Hydrolase]]
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[[Category: Transglycosylase]]

Current revision

Crh5 transglycosylase in complex with NAG

PDB ID 6ibw

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