6ifn

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==Crystal structure of Type III-A CRISPR Csm complex==
==Crystal structure of Type III-A CRISPR Csm complex==
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<StructureSection load='6ifn' size='340' side='right' caption='[[6ifn]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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<StructureSection load='6ifn' size='340' side='right'caption='[[6ifn]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6ifn]] is a 9 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IFN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IFN FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6ifn]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_thermophilus_ND03 Streptococcus thermophilus ND03]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IFN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6IFN FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ifn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ifn OCA], [http://pdbe.org/6ifn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ifn RCSB], [http://www.ebi.ac.uk/pdbsum/6ifn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ifn ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ifn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ifn OCA], [https://pdbe.org/6ifn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ifn RCSB], [https://www.ebi.ac.uk/pdbsum/6ifn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ifn ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Csm, a type III-A CRISPR-Cas interference complex, is a CRISPR RNA (crRNA)-guided RNase that also possesses target RNA-dependent DNase and cyclic oligoadenylate (cOA) synthetase activities. However, the structural features allowing target RNA-binding-dependent activation of DNA cleavage and cOA generation remain unknown. Here, we report the structure of Csm in complex with crRNA together with structures of cognate or non-cognate target RNA bound Csm complexes. We show that depending on complementarity with the 5' tag of crRNA, the 3' anti-tag region of target RNA binds at two distinct sites of the Csm complex. Importantly, the interaction between the non-complementary anti-tag region of cognate target RNA and Csm1 induces a conformational change at the Csm1 subunit that allosterically activates DNA cleavage and cOA generation. Together, our structural studies provide crucial insights into the mechanistic processes required for crRNA-meditated sequence-specific RNA cleavage, RNA target-dependent non-specific DNA cleavage, and cOA generation.
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Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference.,You L, Ma J, Wang J, Artamonova D, Wang M, Liu L, Xiang H, Severinov K, Zhang X, Wang Y Cell. 2018 Nov 26. pii: S0092-8674(18)31451-X. doi: 10.1016/j.cell.2018.10.052. PMID:30503210<ref>PMID:30503210</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6ifn" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Wang, J]]
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[[Category: Large Structures]]
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[[Category: Wang, Y]]
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[[Category: Streptococcus thermophilus ND03]]
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[[Category: You, L]]
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[[Category: Wang J]]
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[[Category: Crispr-cas system]]
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[[Category: Wang Y]]
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[[Category: Csm complex]]
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[[Category: You L]]
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[[Category: Rna binding protein]]
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[[Category: Type iii-a]]
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Current revision

Crystal structure of Type III-A CRISPR Csm complex

PDB ID 6ifn

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