This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5yce
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Sperm whale myoglobin swMb== | ==Sperm whale myoglobin swMb== | ||
| - | <StructureSection load='5yce' size='340' side='right' caption='[[5yce]], [[Resolution|resolution]] 0.77Å' scene=''> | + | <StructureSection load='5yce' size='340' side='right'caption='[[5yce]], [[Resolution|resolution]] 0.77Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5yce]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5yce]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YCE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YCE FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.77Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5yce FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yce OCA], [https://pdbe.org/5yce PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5yce RCSB], [https://www.ebi.ac.uk/pdbsum/5yce PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5yce ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 19: | Line 19: | ||
</div> | </div> | ||
<div class="pdbe-citations 5yce" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5yce" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Myoglobin 3D structures|Myoglobin 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Imamura | + | [[Category: Physeter catodon]] |
| - | [[Category: Isogai | + | [[Category: Imamura H]] |
| - | [[Category: Nakae | + | [[Category: Isogai Y]] |
| - | [[Category: Nakagawa | + | [[Category: Nakae S]] |
| - | [[Category: Shirai | + | [[Category: Nakagawa T]] |
| - | [[Category: Sumi | + | [[Category: Shirai T]] |
| - | [[Category: Takahashi | + | [[Category: Sumi T]] |
| - | [[Category: Tsuneshige | + | [[Category: Takahashi K]] |
| - | + | [[Category: Tsuneshige A]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Sperm whale myoglobin swMb
| |||||||||||
Categories: Large Structures | Physeter catodon | Imamura H | Isogai Y | Nakae S | Nakagawa T | Shirai T | Sumi T | Takahashi K | Tsuneshige A
