3bkw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:49, 30 October 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bkw.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of S-adenosylmethionine dependent methyltransferase (NP_104914.1) from Mesorhizobium loti at 1.60 A resolution==
-
|PDB= 3bkw |SIZE=350|CAPTION= <scene name='initialview01'>3bkw</scene>, resolution 1.600&Aring;
+
<StructureSection load='3bkw' size='340' side='right'caption='[[3bkw]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[3bkw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesorhizobium_japonicum_MAFF_303099 Mesorhizobium japonicum MAFF 303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BKW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BKW FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
|GENE= NP_104914.1, mll3908 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=266835 Mesorhizobium loti MAFF303099])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bkw OCA], [https://pdbe.org/3bkw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bkw RCSB], [https://www.ebi.ac.uk/pdbsum/3bkw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bkw ProSAT], [https://www.topsan.org/Proteins/JCSG/3bkw TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bkw OCA], [http://www.ebi.ac.uk/pdbsum/3bkw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3bkw RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q98F67_RHILO Q98F67_RHILO]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of S-adenosylmethionine dependent methyltransferase (NP_104914.1) from Mesorhizobium loti at 1.60 A resolution'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bk/3bkw_consurf.spt"</scriptWhenChecked>
-
3BKW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mesorhizobium_loti_maff303099 Mesorhizobium loti maff303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BKW OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Mesorhizobium loti maff303099]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bkw ConSurf].
-
[[Category: jcsg]]
+
<div style="clear:both"></div>
-
[[Category: joint center for structural genomic]]
+
__TOC__
-
[[Category: methyltransferase domain]]
+
</StructureSection>
-
[[Category: np_104914 1]]
+
[[Category: Large Structures]]
-
[[Category: protein structure initiative]]
+
[[Category: Mesorhizobium japonicum MAFF 303099]]
-
[[Category: psi-2]]
+
-
[[Category: s-adenosylmethionine dependent methyltransferase]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:27:14 2008''
+

Current revision

Crystal structure of S-adenosylmethionine dependent methyltransferase (NP_104914.1) from Mesorhizobium loti at 1.60 A resolution

PDB ID 3bkw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools