3bnm

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[[Image:3bnm.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of polyamine oxidase FMS1 from Saccharomyces cerevisiae in complex with bis-(3R,3'R)-methylated spermine==
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|PDB= 3bnm |SIZE=350|CAPTION= <scene name='initialview01'>3bnm</scene>, resolution 2.200&Aring;
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<StructureSection load='3bnm' size='340' side='right'caption='[[3bnm]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:Fad+Binding+Site+For+Residue+B+802'>AC1</scene>, <scene name='pdbsite=AC2:Fad+Binding+Site+For+Residue+A+801'>AC2</scene>, <scene name='pdbsite=AC3:Spj+Binding+Site+For+Residue+A+802'>AC3</scene> and <scene name='pdbsite=AC4:Spj+Binding+Site+For+Residue+B+803'>AC4</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SPJ:(3R,3&#39;R)-N~1~,N~1~&#39;-BUTANE-1,4-DIYLDIBUTANE-1,3-DIAMINE'>SPJ</scene>
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<table><tr><td colspan='2'>[[3bnm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BNM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BNM FirstGlance]. <br>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Polyamine_oxidase Polyamine oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.3.11 1.5.3.11] </span>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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|GENE= FMS1, YMR020W, YM9711.09 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SPJ:(3R,3R)-N~1~,N~1~-BUTANE-1,4-DIYLDIBUTANE-1,3-DIAMINE'>SPJ</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bnm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bnm OCA], [https://pdbe.org/3bnm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bnm RCSB], [https://www.ebi.ac.uk/pdbsum/3bnm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bnm ProSAT]</span></td></tr>
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|RELATEDENTRY=[[3bnu|3BNU]]
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bnm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bnm OCA], [http://www.ebi.ac.uk/pdbsum/3bnm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3bnm RCSB]</span>
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== Evolutionary Conservation ==
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}}
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bn/3bnm_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bnm ConSurf].
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<div style="clear:both"></div>
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'''Crystal structure of polyamine oxidase FMS1 from Saccharomyces cerevisiae in complex with bis-(3R,3'R)-methylated spermine'''
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==See Also==
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*[[Polyamine oxidase|Polyamine oxidase]]
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__TOC__
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==About this Structure==
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</StructureSection>
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3BNM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BNM OCA].
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[[Category: Large Structures]]
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[[Category: Polyamine oxidase]]
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[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
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[[Category: Single protein]]
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[[Category: Hao Q]]
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[[Category: Hao, Q.]]
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[[Category: Huang Q]]
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[[Category: Huang, Q.]]
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[[Category: crystal structure]]
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[[Category: fad]]
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[[Category: flavoprotein]]
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[[Category: fms1]]
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[[Category: oxidoreductase]]
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[[Category: polyamine oxidase]]
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[[Category: stereospecificity]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:27:43 2008''
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Current revision

Crystal structure of polyamine oxidase FMS1 from Saccharomyces cerevisiae in complex with bis-(3R,3'R)-methylated spermine

PDB ID 3bnm

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