6q63

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(New page: '''Unreleased structure''' The entry 6q63 is ON HOLD Authors: Basle, A., Crouch, L., Bolam, D. Description: BT0459 Category: Unreleased Structures Category: Bolam, D [[Category...)
Current revision (11:53, 24 January 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6q63 is ON HOLD
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==BT0459==
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<StructureSection load='6q63' size='340' side='right'caption='[[6q63]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6q63]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Q63 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6Q63 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.44&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6q63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6q63 OCA], [https://pdbe.org/6q63 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6q63 RCSB], [https://www.ebi.ac.uk/pdbsum/6q63 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6q63 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A174QSL3_BACT4 A0A174QSL3_BACT4]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Glycans are the major carbon sources available to the human colonic microbiota. Numerous N-glycosylated proteins are found in the human gut, from both dietary and host sources, including immunoglobulins such as IgA that are secreted into the intestine at high levels. Here, we show that many mutualistic gut Bacteroides spp. have the capacity to utilize complex N-glycans (CNGs) as nutrients, including those from immunoglobulins. Detailed mechanistic studies using transcriptomic, biochemical, structural and genetic techniques reveal the pathway employed by Bacteroides thetaiotaomicron (Bt) for CNG degradation. The breakdown process involves an extensive enzymatic apparatus encoded by multiple non-adjacent loci and comprises 19 different carbohydrate-active enzymes from different families, including a CNG-specific endo-glycosidase activity. Furthermore, CNG degradation involves the activity of carbohydrate-active enzymes that have previously been implicated in the degradation of other classes of glycan. This complex and diverse apparatus provides Bt with the capacity to access the myriad different structural variants of CNGs likely to be found in the intestinal niche.
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Authors: Basle, A., Crouch, L., Bolam, D.
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Complex N-glycan breakdown by gut Bacteroides involves an extensive enzymatic apparatus encoded by multiple co-regulated genetic loci.,Briliute J, Urbanowicz PA, Luis AS, Basle A, Paterson N, Rebello O, Hendel J, Ndeh DA, Lowe EC, Martens EC, Spencer DIR, Bolam DN, Crouch LI Nat Microbiol. 2019 Jun 3. pii: 10.1038/s41564-019-0466-x. doi:, 10.1038/s41564-019-0466-x. PMID:31160824<ref>PMID:31160824</ref>
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Description: BT0459
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Bolam, D]]
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<div class="pdbe-citations 6q63" style="background-color:#fffaf0;"></div>
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[[Category: Crouch, L]]
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[[Category: Basle, A]]
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==See Also==
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*[[Beta-Hexosaminidase|Beta-Hexosaminidase]]
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*[[Beta-Hexosaminidase 3D structures|Beta-Hexosaminidase 3D structures]]
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*[[Beta-N-acetylhexosaminidase 3D structures|Beta-N-acetylhexosaminidase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Bacteroides thetaiotaomicron]]
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[[Category: Large Structures]]
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[[Category: Basle A]]
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[[Category: Bolam D]]
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[[Category: Crouch L]]

Current revision

BT0459

PDB ID 6q63

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