3bvc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:31, 21 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bvc.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of uncharacterized protein Ism_01780 from Roseovarius nubinhibens ISM==
-
|PDB= 3bvc |SIZE=350|CAPTION= <scene name='initialview01'>3bvc</scene>, resolution 2.75&Aring;
+
<StructureSection load='3bvc' size='340' side='right'caption='[[3bvc]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
-
|SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+For+Residue+A+301'>AC1</scene>, <scene name='pdbsite=AC2:Ca+Binding+Site+For+Residue+A+302'>AC2</scene>, <scene name='pdbsite=AC3:Ni+Binding+Site+For+Residue+A+304'>AC3</scene> and <scene name='pdbsite=AC4:Ni+Binding+Site+For+Residue+B+305'>AC4</scene>
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>
+
<table><tr><td colspan='2'>[[3bvc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ISM Roseovarius nubinhibens ISM]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BVC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BVC FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
-
|GENE= ISM_01780 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89187 Roseovarius nubinhibens ISM])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bvc OCA], [https://pdbe.org/3bvc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bvc RCSB], [https://www.ebi.ac.uk/pdbsum/3bvc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bvc ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bvc TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bvc OCA], [http://www.ebi.ac.uk/pdbsum/3bvc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3bvc RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/A3SHZ8_ROSNI A3SHZ8_ROSNI]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of uncharacterized protein Ism_01780 from Roseovarius nubinhibens ISM'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bv/3bvc_consurf.spt"</scriptWhenChecked>
-
3BVC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Roseovarius_nubinhibens_ism Roseovarius nubinhibens ism]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BVC OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Roseovarius nubinhibens ism]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Almo, S C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bvc ConSurf].
-
[[Category: Burley, S K.]]
+
<div style="clear:both"></div>
-
[[Category: Iizuka, M.]]
+
__TOC__
-
[[Category: Maletic, M.]]
+
</StructureSection>
-
[[Category: Meyer, A J.]]
+
[[Category: Large Structures]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Roseovarius nubinhibens ISM]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Almo SC]]
-
[[Category: Rutter, M.]]
+
[[Category: Burley SK]]
-
[[Category: Sauder, J M.]]
+
[[Category: Iizuka M]]
-
[[Category: Smith, D.]]
+
[[Category: Maletic M]]
-
[[Category: Toro, R.]]
+
[[Category: Meyer AJ]]
-
[[Category: Wasserman, S.]]
+
[[Category: Patskovsky Y]]
-
[[Category: iron-binding protein]]
+
[[Category: Rutter M]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: Sauder JM]]
-
[[Category: nickel]]
+
[[Category: Smith D]]
-
[[Category: nysgxrc]]
+
[[Category: Toro R]]
-
[[Category: protein structure initiative]]
+
[[Category: Wasserman S]]
-
[[Category: psi-2]]
+
-
[[Category: rhodobacterale]]
+
-
[[Category: roseovarius nubinhibens ism]]
+
-
[[Category: structural genomic]]
+
-
[[Category: unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:29:21 2008''
+

Current revision

Crystal structure of uncharacterized protein Ism_01780 from Roseovarius nubinhibens ISM

PDB ID 3bvc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3bvc"
Personal tools