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3ceb

From Proteopedia

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[[Image:3ceb.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of a putative 4-amino-4-deoxychorismate lyase (hs_0128) from haemophilus somnus 129pt at 2.40 A resolution==
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|PDB= 3ceb |SIZE=350|CAPTION= <scene name='initialview01'>3ceb</scene>, resolution 2.400&Aring;
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<StructureSection load='3ceb' size='340' side='right'caption='[[3ceb]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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|SITE= <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+A+194'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+A+195'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+196'>AC3</scene>, <scene name='pdbsite=AC4:So4+Binding+Site+For+Residue+A+197'>AC4</scene>, <scene name='pdbsite=AC5:So4+Binding+Site+For+Residue+A+198'>AC5</scene> and <scene name='pdbsite=AC6:Gol+Binding+Site+For+Residue+A+199'>AC6</scene>
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LLP:2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE)'>LLP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
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<table><tr><td colspan='2'>[[3ceb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Histophilus_somni_129PT Histophilus somni 129PT]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CEB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CEB FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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|GENE= YP_718332.1, HS_0128 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=205914 Haemophilus somnus 129PT])
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ceb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ceb OCA], [https://pdbe.org/3ceb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ceb RCSB], [https://www.ebi.ac.uk/pdbsum/3ceb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ceb ProSAT], [https://www.topsan.org/Proteins/JCSG/3ceb TOPSAN]</span></td></tr>
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|DOMAIN=
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</table>
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|RELATEDENTRY=
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== Function ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ceb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ceb OCA], [http://www.ebi.ac.uk/pdbsum/3ceb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3ceb RCSB]</span>
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[https://www.uniprot.org/uniprot/Q0I0Z6_HAES1 Q0I0Z6_HAES1]
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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'''Crystal structure of D-aminoacid aminotransferase-like PLP-dependent enzyme (YP_718332.1) from Haemophilus somnus 129PT at 2.40 A resolution'''
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ce/3ceb_consurf.spt"</scriptWhenChecked>
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==About this Structure==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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3CEB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_somnus_129pt Haemophilus somnus 129pt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CEB OCA].
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Haemophilus somnus 129pt]]
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</jmolCheckbox>
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[[Category: Single protein]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ceb ConSurf].
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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<div style="clear:both"></div>
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[[Category: d-aminoacid aminotransferase-like plp-dependent enzyme]]
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__TOC__
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[[Category: jcsg]]
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</StructureSection>
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[[Category: joint center for structural genomic]]
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[[Category: Histophilus somni 129PT]]
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[[Category: protein structure initiative]]
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[[Category: Large Structures]]
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[[Category: psi-2]]
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[[Category: structural genomic]]
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[[Category: yp_718332 1]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:31:55 2008''
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Current revision

Crystal structure of a putative 4-amino-4-deoxychorismate lyase (hs_0128) from haemophilus somnus 129pt at 2.40 A resolution

PDB ID 3ceb

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