6ajf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:32, 27 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis==
==Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis==
-
<StructureSection load='6ajf' size='340' side='right' caption='[[6ajf]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='6ajf' size='340' side='right'caption='[[6ajf]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6ajf]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6AJF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6ajf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4] and [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis_MC2_155 Mycolicibacterium smegmatis MC2 155]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6AJF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=L6T:alpha-D-glucopyranosyl+6-O-dodecyl-alpha-D-glucopyranoside'>L6T</scene>, <scene name='pdbligand=MHA:(CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC+ACID'>MHA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.698&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=L6T:alpha-D-glucopyranosyl+6-O-dodecyl-alpha-D-glucopyranoside'>L6T</scene>, <scene name='pdbligand=MHA:(CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC+ACID'>MHA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ajf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ajf OCA], [http://pdbe.org/6ajf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ajf RCSB], [http://www.ebi.ac.uk/pdbsum/6ajf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ajf ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ajf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ajf OCA], [https://pdbe.org/6ajf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ajf RCSB], [https://www.ebi.ac.uk/pdbsum/6ajf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ajf ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D9IEF7_BPT4 D9IEF7_BPT4] [https://www.uniprot.org/uniprot/MMPL3_MYCS2 MMPL3_MYCS2] Transports trehalose monomycolate (TMM) to the cell wall (PubMed:31239378, PubMed:22520756, PubMed:28698380). Flips TMM across the inner membrane. Membrane potential is not required for this function (PubMed:28698380). Transports probably phosphatidylethanolamine (PE) as well. Binds specifically both TMM and PE, but not trehalose dimycolate (TDM). Binds also diacylglycerol (DAG) and other phospholipids, including phosphatidylglycerol (PG), phosphatidylinositol (PI), and cardiolipin (CDL) (PubMed:31113875). Contributes to membrane potential, cell wall composition, antibiotic susceptibility and fitness (PubMed:28703701).<ref>PMID:22520756</ref> <ref>PMID:28698380</ref> <ref>PMID:28703701</ref> <ref>PMID:31113875</ref> <ref>PMID:31239378</ref>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lysozyme]]
+
[[Category: Escherichia virus T4]]
-
[[Category: Li, J]]
+
[[Category: Large Structures]]
-
[[Category: Rao, Z H]]
+
[[Category: Mycolicibacterium smegmatis MC2 155]]
-
[[Category: Wu, L J]]
+
[[Category: Li J]]
-
[[Category: Yang, H T]]
+
[[Category: Rao ZH]]
-
[[Category: Yang, X L]]
+
[[Category: Wu LJ]]
-
[[Category: Zhang, B]]
+
[[Category: Yang HT]]
-
[[Category: Cell wall biosynthesis]]
+
[[Category: Yang XL]]
-
[[Category: Drug target]]
+
[[Category: Zhang B]]
-
[[Category: Hydrolase]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Rnd family]]
+
-
[[Category: Transporter]]
+

Current revision

Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis

PDB ID 6ajf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools