This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6a9b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:31, 27 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==T4 dCMP hydroxymethylase structure solved by I-SAD using a home source==
==T4 dCMP hydroxymethylase structure solved by I-SAD using a home source==
-
<StructureSection load='6a9b' size='340' side='right' caption='[[6a9b]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
+
<StructureSection load='6a9b' size='340' side='right'caption='[[6a9b]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6a9b]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6A9B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6A9B FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6a9b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6A9B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6A9B FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6a9a|6a9a]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Deoxycytidylate_5-hydroxymethyltransferase Deoxycytidylate 5-hydroxymethyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.2.8 2.1.2.8] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6a9b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6a9b OCA], [https://pdbe.org/6a9b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6a9b RCSB], [https://www.ebi.ac.uk/pdbsum/6a9b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6a9b ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6a9b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6a9b OCA], [http://pdbe.org/6a9b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6a9b RCSB], [http://www.ebi.ac.uk/pdbsum/6a9b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6a9b ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DCHM_BPT4 DCHM_BPT4]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Deoxycytidylate 5-hydroxymethyltransferase]]
+
[[Category: Escherichia virus T4]]
-
[[Category: Park, S H]]
+
[[Category: Large Structures]]
-
[[Category: Song, H K]]
+
[[Category: Park SH]]
-
[[Category: Pyrimidine hydroxymethylase]]
+
[[Category: Song HK]]
-
[[Category: Transferase]]
+

Current revision

T4 dCMP hydroxymethylase structure solved by I-SAD using a home source

PDB ID 6a9b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools