6qdw

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'''Unreleased structure'''
 
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The entry 6qdw is ON HOLD
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==Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide==
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<SX load='6qdw' size='340' side='right' viewer='molstar' caption='[[6qdw]], [[Resolution|resolution]] 2.83&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6qdw]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BL21(DE3) Escherichia coli BL21(DE3)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QDW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6QDW FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.83&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6qdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qdw OCA], [https://pdbe.org/6qdw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6qdw RCSB], [https://www.ebi.ac.uk/pdbsum/6qdw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6qdw ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RL28_ECOLI RL28_ECOLI]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Understanding the conformational sampling of translation-arrested ribosome nascent chain complexes is key to understand co-translational folding. Up to now, coupling of cysteine oxidation, disulfide bond formation and structure formation in nascent chains has remained elusive. Here, we investigate the eye-lens protein gammaB-crystallin in the ribosomal exit tunnel. Using mass spectrometry, theoretical simulations, dynamic nuclear polarization-enhanced solid-state nuclear magnetic resonance and cryo-electron microscopy, we show that thiol groups of cysteine residues undergo S-glutathionylation and S-nitrosylation and form non-native disulfide bonds. Thus, covalent modification chemistry occurs already prior to nascent chain release as the ribosome exit tunnel provides sufficient space even for disulfide bond formation which can guide protein folding.
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Authors: Schulte, L., Reitz, J., Hodirnau, V.V., Kudlinzki, D., Mao, J., Glaubitz, C., Frangakis, A., Schwalbe, H.
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Cysteine oxidation and disulfide formation in the ribosomal exit tunnel.,Schulte L, Mao J, Reitz J, Sreeramulu S, Kudlinzki D, Hodirnau VV, Meier-Credo J, Saxena K, Buhr F, Langer JD, Blackledge M, Frangakis AS, Glaubitz C, Schwalbe H Nat Commun. 2020 Nov 4;11(1):5569. doi: 10.1038/s41467-020-19372-x. PMID:33149120<ref>PMID:33149120</ref>
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Description: Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Glaubitz, C]]
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<div class="pdbe-citations 6qdw" style="background-color:#fffaf0;"></div>
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[[Category: Kudlinzki, D]]
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[[Category: Frangakis, A]]
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==See Also==
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[[Category: Mao, J]]
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*[[Crystallin 3D structures|Crystallin 3D structures]]
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[[Category: Schwalbe, H]]
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== References ==
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[[Category: Schulte, L]]
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<references/>
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[[Category: Hodirnau, V.V]]
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__TOC__
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[[Category: Reitz, J]]
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</SX>
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[[Category: Large Structures]]
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[[Category: Frangakis A]]
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[[Category: Glaubitz C]]
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[[Category: Hodirnau VV]]
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[[Category: Kudlinzki D]]
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[[Category: Mao J]]
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[[Category: Reitz J]]
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[[Category: Schulte L]]
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[[Category: Schwalbe H]]

Current revision

Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide

6qdw, resolution 2.83Å

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