2elh

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(New page: 200px {{Structure |PDB= 2elh |SIZE=350|CAPTION= <scene name='initialview01'>2elh</scene> |SITE= |LIGAND= |ACTIVITY= |GENE= dan ([http://www.ncbi.nlm.nih.gov/Ta...)
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[[Image:2elh.jpg|left|200px]]
 
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{{Structure
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==Solution structure of the CENP-B N-terminal DNA-binding domain of fruit fly distal antenna CG11849-PA==
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|PDB= 2elh |SIZE=350|CAPTION= <scene name='initialview01'>2elh</scene>
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<StructureSection load='2elh' size='340' side='right'caption='[[2elh]]' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND=
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<table><tr><td colspan='2'>[[2elh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ELH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ELH FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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|GENE= dan ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 Drosophila melanogaster])
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2elh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2elh OCA], [https://pdbe.org/2elh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2elh RCSB], [https://www.ebi.ac.uk/pdbsum/2elh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2elh ProSAT], [https://www.topsan.org/Proteins/RSGI/2elh TOPSAN]</span></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam04218 CENP-B_N]</span>
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</table>
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|RELATEDENTRY=
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== Function ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2elh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2elh OCA], [http://www.ebi.ac.uk/pdbsum/2elh PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2elh RCSB]</span>
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[https://www.uniprot.org/uniprot/DAN_DROME DAN_DROME] Probable transcription factor with a role in the retinal determination (RD) network. Regulates ato expression and is required for normal R8 induction and differentiation. Danr appears to repress Dan expression, but Dan is required for Danr expression anterior to the morphogenetic furrow (MF). Dan and Danr lie downstream of so and require dac function for highest levels of expression. Contributes to differentiation of antenna-specific characteristics; effector gene that acts downstream of homothorax (hth), Distal-less (Dll), cut (ct) and spineless (ss) genes to control differentiation of distal antennal structures.<ref>PMID:12571108</ref> <ref>PMID:17493605</ref>
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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'''Solution structure of the CENP-B N-terminal DNA-binding domain of fruit fly distal antenna CG11849-PA'''
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/el/2elh_consurf.spt"</scriptWhenChecked>
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==About this Structure==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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2ELH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ELH OCA].
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2elh ConSurf].
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<div style="clear:both"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Drosophila melanogaster]]
[[Category: Drosophila melanogaster]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Harada, T.]]
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[[Category: Harada T]]
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[[Category: Kigawa, T.]]
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[[Category: Kigawa T]]
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[[Category: Koshiba, S.]]
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[[Category: Koshiba S]]
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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[[Category: Tanaka A]]
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[[Category: Tanaka, A.]]
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[[Category: Tochio N]]
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[[Category: Tochio, N.]]
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[[Category: Umehara T]]
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[[Category: Umehara, T.]]
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[[Category: Watanabe S]]
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[[Category: Watanabe, S.]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S.]]
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[[Category: dna binding protein]]
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[[Category: ld40883p]]
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[[Category: national project on protein structural and functional analyse]]
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[[Category: nppsfa]]
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[[Category: riken structural genomics/proteomics initiative]]
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[[Category: rsgi]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 2 11:56:38 2008''
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Current revision

Solution structure of the CENP-B N-terminal DNA-binding domain of fruit fly distal antenna CG11849-PA

PDB ID 2elh

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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