5zmw
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of the E309Q mutant of SR Ca2+-ATPase in E2(TG)== | |
+ | <StructureSection load='5zmw' size='340' side='right'caption='[[5zmw]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5zmw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZMW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ZMW FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMU:DECYL-BETA-D-MALTOPYRANOSIDE'>DMU</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TG1:[(3S,3aR,4S,6S,6aR,7S,8S,9bS)-6-acetyloxy-4-butanoyloxy-3,3a-dihydroxy-3,6,9-trimethyl-8-[(Z)-2-methylbut-2-enoyl]oxy-2-oxo-4,5,6a,7,8,9b-hexahydroazuleno[4,5-b]furan-7-yl]+octanoate'>TG1</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5zmw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zmw OCA], [https://pdbe.org/5zmw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5zmw RCSB], [https://www.ebi.ac.uk/pdbsum/5zmw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5zmw ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/AT2A1_RABIT AT2A1_RABIT] This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction (By similarity). | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Ca(2+)-ATPase of sarcoplasmic reticulum (SERCA1a) pumps two Ca(2+) per ATP hydrolyzed from the cytoplasm and two or three protons in the opposite direction. In the E2 state, after transferring Ca(2+) into the lumen of sarcoplasmic reticulum, all of the acidic residues that coordinate Ca(2+) are thought to be protonated, including the gating residue Glu309. Therefore a Glu309Gln substitution is not expected to significantly perturb the structure. Here we report crystal structures of the Glu309Gln and Glu309Ala mutants of SERCA1a under E2 conditions. The Glu309Gln mutant exhibits, unexpectedly, large structural rearrangements in both the cytoplasmic and transmembrane domains, apparently uncoupling them. However, the structure definitely represents E2 and, together with the help of quantum chemical calculations, allows us to postulate a mechanism for the E2 --> E1 transition triggered by deprotonation of Glu309. | ||
- | + | Mechanism of the E2 to E1 transition in Ca(2+) pump revealed by crystal structures of gating residue mutants.,Tsunekawa N, Ogawa H, Tsueda J, Akiba T, Toyoshima C Proc Natl Acad Sci U S A. 2018 Nov 27. pii: 1815472115. doi:, 10.1073/pnas.1815472115. PMID:30482857<ref>PMID:30482857</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[ | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 5zmw" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | |
- | [[Category: Hirata | + | ==See Also== |
- | [[Category: Ogawa | + | *[[ATPase 3D structures|ATPase 3D structures]] |
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Oryctolagus cuniculus]] | ||
+ | [[Category: Hirata A]] | ||
+ | [[Category: Ogawa H]] | ||
+ | [[Category: Toyoshima C]] | ||
+ | [[Category: Tsueda J]] |
Current revision
Crystal structure of the E309Q mutant of SR Ca2+-ATPase in E2(TG)
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