This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6cf3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6cf3" [edit=sysop:move=sysop])
Current revision (15:02, 4 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Ethylene forming enzyme Y306A variant in complex with manganese and 2-oxoglutarate==
==Ethylene forming enzyme Y306A variant in complex with manganese and 2-oxoglutarate==
-
<StructureSection load='6cf3' size='340' side='right' caption='[[6cf3]], [[Resolution|resolution]] 1.12&Aring;' scene=''>
+
<StructureSection load='6cf3' size='340' side='right'caption='[[6cf3]], [[Resolution|resolution]] 1.12&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6cf3]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CF3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6CF3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6cf3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_savastanoi_pv._phaseolicola Pseudomonas savastanoi pv. phaseolicola]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CF3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6CF3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.12&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6cf3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cf3 OCA], [http://pdbe.org/6cf3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6cf3 RCSB], [http://www.ebi.ac.uk/pdbsum/6cf3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6cf3 ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6cf3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cf3 OCA], [https://pdbe.org/6cf3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6cf3 RCSB], [https://www.ebi.ac.uk/pdbsum/6cf3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6cf3 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/EFE_PSESH EFE_PSESH]] Simultaneously catalyzes two reactions, namely formation of ethylene and of succinate from 2-oxoglutarate, with a molar ratio of 2:1.<ref>PMID:1445291</ref>
+
[https://www.uniprot.org/uniprot/EFE_PSESH EFE_PSESH] Simultaneously catalyzes two reactions, namely formation of ethylene and of succinate from 2-oxoglutarate, with a molar ratio of 2:1.<ref>PMID:1445291</ref>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Fellner, M]]
+
[[Category: Large Structures]]
-
[[Category: Hausinger, R P]]
+
[[Category: Pseudomonas savastanoi pv. phaseolicola]]
-
[[Category: Hu, J]]
+
[[Category: Fellner M]]
-
[[Category: Martinez, S]]
+
[[Category: Hausinger RP]]
-
[[Category: 2-oxoglutarate]]
+
[[Category: Hu J]]
-
[[Category: Ethylene glycol]]
+
[[Category: Martinez S]]
-
[[Category: L-arginine]]
+
-
[[Category: Manganese]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Partially occupied]]
+
-
[[Category: Split occupancy]]
+
-
[[Category: Tyrosine to alanine]]
+
-
[[Category: Variant induced fold change]]
+

Current revision

Ethylene forming enzyme Y306A variant in complex with manganese and 2-oxoglutarate

PDB ID 6cf3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools