6qnm
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6qnm is ON HOLD Authors: Muok, A.R., Chong, J.E., Crane, B.R. Description: Apo state of chemotaxis sensor ODP from T. denticola [[Category: Unrelea...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Apo state of chemotaxis sensor ODP from T. denticola== | |
| + | <StructureSection load='6qnm' size='340' side='right'caption='[[6qnm]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6qnm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Treponema_denticola_ATCC_35404 Treponema denticola ATCC 35404]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QNM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6QNM FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6qnm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qnm OCA], [https://pdbe.org/6qnm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6qnm RCSB], [https://www.ebi.ac.uk/pdbsum/6qnm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6qnm ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Many bacteria contain cytoplasmic chemoreceptors that lack sensor domains. Here, we demonstrate that such cytoplasmic receptors found in 8 different bacterial and archaeal phyla genetically couple to metalloproteins related to beta-lactamases and nitric oxide reductases. We show that this oxygen-binding di-iron protein (ODP) acts as a sensor for chemotactic responses to both iron and oxygen in the human pathogen Treponema denticola (Td). The ODP di-iron site binds oxygen at high affinity to reversibly form an unusually stable mu-peroxo adduct. Crystal structures of ODP from Td and the thermophile Thermotoga maritima (Tm) in the Fe[III]2-O2 (2-), Zn[II], and apo states display differences in subunit association, conformation, and metal coordination that indicate potential mechanisms for sensing. In reconstituted systems, iron-peroxo ODP destabilizes the phosphorylated form of the receptor-coupled histidine kinase CheA, thereby providing a biochemical link between oxygen sensing and chemotaxis in diverse prokaryotes, including anaerobes of ancient origin. | ||
| - | + | A di-iron protein recruited as an Fe[II] and oxygen sensor for bacterial chemotaxis functions by stabilizing an iron-peroxy species.,Muok AR, Deng Y, Gumerov VM, Chong JE, DeRosa JR, Kurniyati K, Coleman RE, Lancaster KM, Li C, Zhulin IB, Crane BR Proc Natl Acad Sci U S A. 2019 Jul 3. pii: 1904234116. doi:, 10.1073/pnas.1904234116. PMID:31270241<ref>PMID:31270241</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 6qnm" style="background-color:#fffaf0;"></div> |
| - | [[Category: Crane | + | == References == |
| - | [[Category: | + | <references/> |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Treponema denticola ATCC 35404]] | ||
| + | [[Category: Chong JE]] | ||
| + | [[Category: Crane BR]] | ||
| + | [[Category: Muok AR]] | ||
Current revision
Apo state of chemotaxis sensor ODP from T. denticola
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