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5ngo

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Current revision (12:56, 15 November 2023) (edit) (undo)
 
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==Crystal structure of the PARP domain of Arabidopsis RADICAL-INDUCED CELL DEATH1==
==Crystal structure of the PARP domain of Arabidopsis RADICAL-INDUCED CELL DEATH1==
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<StructureSection load='5ngo' size='340' side='right' caption='[[5ngo]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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<StructureSection load='5ngo' size='340' side='right'caption='[[5ngo]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5ngo]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NGO FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5ngo]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NGO FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RCD1, ATP8, CEO1, At1g32230, F3C3.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ngo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ngo OCA], [http://pdbe.org/5ngo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ngo RCSB], [http://www.ebi.ac.uk/pdbsum/5ngo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ngo ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ngo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ngo OCA], [https://pdbe.org/5ngo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ngo RCSB], [https://www.ebi.ac.uk/pdbsum/5ngo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ngo ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/RCD1_ARATH RCD1_ARATH]] Inactive ADP-ribosyltransferase that functions with SRO1 to regulate oxidative stress, hormonal and developmental responses. Required for embryogenesis, vegetative and reproductive development, and abiotic stress responses. May regulate several stress-responsive genes. Seems to play a larger developmental role than SRO1. Does not bind NAD in vitro.<ref>PMID:11018516</ref> <ref>PMID:11041881</ref> <ref>PMID:14657410</ref> <ref>PMID:15208394</ref> <ref>PMID:15728341</ref> <ref>PMID:16926493</ref> <ref>PMID:19548978</ref> <ref>PMID:19625634</ref> <ref>PMID:20226034</ref> <ref>PMID:21172813</ref>
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[https://www.uniprot.org/uniprot/RCD1_ARATH RCD1_ARATH] Inactive ADP-ribosyltransferase that functions with SRO1 to regulate oxidative stress, hormonal and developmental responses. Required for embryogenesis, vegetative and reproductive development, and abiotic stress responses. May regulate several stress-responsive genes. Seems to play a larger developmental role than SRO1. Does not bind NAD in vitro.<ref>PMID:11018516</ref> <ref>PMID:11041881</ref> <ref>PMID:14657410</ref> <ref>PMID:15208394</ref> <ref>PMID:15728341</ref> <ref>PMID:16926493</ref> <ref>PMID:19548978</ref> <ref>PMID:19625634</ref> <ref>PMID:20226034</ref> <ref>PMID:21172813</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
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*[[Poly (ADP-ribose) polymerase|Poly (ADP-ribose) polymerase]]
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*[[Poly(ADP-ribose) polymerase 3D structures|Poly(ADP-ribose) polymerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Arath]]
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[[Category: Arabidopsis thaliana]]
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[[Category: Banfield, M J]]
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[[Category: Large Structures]]
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[[Category: Wirthmueller, L]]
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[[Category: Banfield MJ]]
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[[Category: Parp]]
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[[Category: Wirthmueller L]]
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[[Category: Plant protein]]
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Current revision

Crystal structure of the PARP domain of Arabidopsis RADICAL-INDUCED CELL DEATH1

PDB ID 5ngo

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