1cwy

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(New page: 200px {{Structure |PDB= 1cwy |SIZE=350|CAPTION= <scene name='initialview01'>1cwy</scene>, resolution 2.00&Aring; |SITE= |LIGAND= |ACTIVITY= <span class='plainli...)
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[[Image:1cwy.jpg|left|200px]]
 
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{{Structure
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==CRYSTAL STRUCTURE OF AMYLOMALTASE FROM THERMUS AQUATICUS, A GLYCOSYLTRANSFERASE CATALYSING THE PRODUCTION OF LARGE CYCLIC GLUCANS==
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|PDB= 1cwy |SIZE=350|CAPTION= <scene name='initialview01'>1cwy</scene>, resolution 2.00&Aring;
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<StructureSection load='1cwy' size='340' side='right'caption='[[1cwy]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND=
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<table><tr><td colspan='2'>[[1cwy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CWY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CWY FirstGlance]. <br>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/4-alpha-glucanotransferase 4-alpha-glucanotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.25 2.4.1.25] </span>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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|GENE=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cwy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cwy OCA], [https://pdbe.org/1cwy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cwy RCSB], [https://www.ebi.ac.uk/pdbsum/1cwy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cwy ProSAT]</span></td></tr>
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|DOMAIN=
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</table>
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|RELATEDENTRY=
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== Function ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cwy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cwy OCA], [http://www.ebi.ac.uk/pdbsum/1cwy PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1cwy RCSB]</span>
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[https://www.uniprot.org/uniprot/MALQ_THETH MALQ_THETH]
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cw/1cwy_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cwy ConSurf].
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<div style="clear:both"></div>
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'''CRYSTAL STRUCTURE OF AMYLOMALTASE FROM THERMUS AQUATICUS, A GLYCOSYLTRANSFERASE CATALYSING THE PRODUCTION OF LARGE CYCLIC GLUCANS'''
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==See Also==
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*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
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__TOC__
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==Overview==
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</StructureSection>
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Amylomaltase is involved in the metabolism of starch, one of the most important polysaccharides in nature. A unique feature of amylomaltase is its ability to catalyze the formation of cyclic amylose. In contrast to the well studied cyclodextrin glucanotransferases (CGTases), which synthesize cycloamylose with a ring size (degree of polymerization or DP) of 6-8, the amylomaltase from Thermus aquaticus produces cycloamyloses with a DP of 22 and higher. The crystal structure of amylomaltase from Thermus aquaticus was determined to 2.0 A resolution. It is a member of the alpha-amylase superfamily of enzymes, whose core structure consists of a (beta, alpha)(8) barrel. In amylomaltase, the 8-fold symmetry of this barrel is disrupted by several insertions between the barrel strands. The largest insertions are between the third and fifth barrel strands, where two insertions form subdomain B1, as well as between the second and third barrel strands, forming the alpha-helical subdomain B2. Whereas part of subdomain B1 is also present in other enzyme structures of the alpha-amylase superfamily, subdomain B2 is unique to amylomaltase. Remarkably, the C-terminal domain C, which is present in all related enzymes of the alpha-amylase family, is missing in amylomaltase. Amylomaltase shows a similar arrangement of the catalytic side-chains (two Asp residues and one Glu residue) as in previously characterized members of the alpha-amylase superfamily, indicating similar mechanisms of the glycosyl transfer reaction. In amylomaltase, a conserved loop of around eight amino acid residues is partially shielding the active center. This loop, which is well conserved among other amylomaltases, may sterically hinder the formation of small cyclic products.
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[[Category: Large Structures]]
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==About this Structure==
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1CWY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CWY OCA].
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==Reference==
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Crystal structure of amylomaltase from thermus aquaticus, a glycosyltransferase catalysing the production of large cyclic glucans., Przylas I, Tomoo K, Terada Y, Takaha T, Fujii K, Saenger W, Strater N, J Mol Biol. 2000 Feb 25;296(3):873-86. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10677288 10677288]
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[[Category: 4-alpha-glucanotransferase]]
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[[Category: Single protein]]
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[[Category: Thermus aquaticus]]
[[Category: Thermus aquaticus]]
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[[Category: Fuji, K.]]
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[[Category: Fuji K]]
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[[Category: Przylas, I.]]
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[[Category: Przylas I]]
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[[Category: Saenger, W.]]
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[[Category: Saenger W]]
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[[Category: Straeter, N.]]
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[[Category: Straeter N]]
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[[Category: Takaha, T.]]
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[[Category: Takaha T]]
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[[Category: Terada, Y.]]
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[[Category: Terada Y]]
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[[Category: Tomoo, K.]]
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[[Category: Tomoo K]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat Apr 5 18:57:28 2008''
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Current revision

CRYSTAL STRUCTURE OF AMYLOMALTASE FROM THERMUS AQUATICUS, A GLYCOSYLTRANSFERASE CATALYSING THE PRODUCTION OF LARGE CYCLIC GLUCANS

PDB ID 1cwy

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