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6o0q
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6o0q is ON HOLD Authors: Description: Category: Unreleased Structures) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of the TIR domain from human SARM1 in complex with ribose== | |
| + | <StructureSection load='6o0q' size='340' side='right'caption='[[6o0q]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6o0q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6O0Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6O0Q FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDR:BETA-D-RIBOFURANOSYL'>BDR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6o0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6o0q OCA], [https://pdbe.org/6o0q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6o0q RCSB], [https://www.ebi.ac.uk/pdbsum/6o0q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6o0q ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/SARM1_HUMAN SARM1_HUMAN] Negative regulator of MYD88- and TRIF-dependent toll-like receptor signaling pathway which plays a pivotal role in activating axonal degeneration following injury. Promotes Wallerian degeneration an injury-induced axonal death pathway which involves degeneration of an axon distal to the injury site. Can activate neuronal death in response to stress. Regulates dendritic arborization through the MAPK4-JNK pathway. Involved in innate immune response. Inhibits both TICAM1/TRIF- and MYD88-dependent activation of JUN/AP-1, TRIF-dependent activation of NF-kappa-B and IRF3, and the phosphorylation of MAPK14/p38.<ref>PMID:15123841</ref> <ref>PMID:16964262</ref> <ref>PMID:16985498</ref> <ref>PMID:20306472</ref> | ||
| - | + | ==See Also== | |
| - | + | *[[SARM1 3D structures|SARM1 3D structures]] | |
| - | + | == References == | |
| - | [[Category: | + | <references/> |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Boden M]] | ||
| + | [[Category: Bosanac T]] | ||
| + | [[Category: Burdett H]] | ||
| + | [[Category: Casey L]] | ||
| + | [[Category: Chen J]] | ||
| + | [[Category: Coleman MP]] | ||
| + | [[Category: Deerain N]] | ||
| + | [[Category: Dodds PN]] | ||
| + | [[Category: Dry IB]] | ||
| + | [[Category: Ericsson DJ]] | ||
| + | [[Category: Foley G]] | ||
| + | [[Category: Gilley J]] | ||
| + | [[Category: Gu W]] | ||
| + | [[Category: Horsefield S]] | ||
| + | [[Category: Hughes RO]] | ||
| + | [[Category: Kobe B]] | ||
| + | [[Category: Lai J]] | ||
| + | [[Category: Manik MK]] | ||
| + | [[Category: Nanson JD]] | ||
| + | [[Category: Rank M]] | ||
| + | [[Category: Rathjen JP]] | ||
| + | [[Category: Shi Y]] | ||
| + | [[Category: Staskawicz BJ]] | ||
| + | [[Category: Tiancong Q]] | ||
| + | [[Category: Ve T]] | ||
| + | [[Category: Williams SJ]] | ||
| + | [[Category: Zhang X]] | ||
| + | [[Category: Von Itzstein M]] | ||
Current revision
Crystal structure of the TIR domain from human SARM1 in complex with ribose
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Categories: Homo sapiens | Large Structures | Boden M | Bosanac T | Burdett H | Casey L | Chen J | Coleman MP | Deerain N | Dodds PN | Dry IB | Ericsson DJ | Foley G | Gilley J | Gu W | Horsefield S | Hughes RO | Kobe B | Lai J | Manik MK | Nanson JD | Rank M | Rathjen JP | Shi Y | Staskawicz BJ | Tiancong Q | Ve T | Williams SJ | Zhang X | Von Itzstein M
