2d2g

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==OpdA from Agrobacterium radiobacter with bound product dimethylthiophosphate==
==OpdA from Agrobacterium radiobacter with bound product dimethylthiophosphate==
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<StructureSection load='2d2g' size='340' side='right' caption='[[2d2g]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
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<StructureSection load='2d2g' size='340' side='right'caption='[[2d2g]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2d2g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"achromobacter_radiobacter"_(beijerinck_and_van_delden_1902)_bergey_et_al._1934 "achromobacter radiobacter" (beijerinck and van delden 1902) bergey et al. 1934]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D2G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2D2G FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2d2g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D2G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D2G FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=DZZ:O,O-DIMETHYL+HYDROGEN+THIOPHOSPHATE'>DZZ</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=DZZ:O,O-DIMETHYL+HYDROGEN+THIOPHOSPHATE'>DZZ</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2d2h|2d2h]], [[2d2j|2d2j]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d2g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d2g OCA], [https://pdbe.org/2d2g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d2g RCSB], [https://www.ebi.ac.uk/pdbsum/2d2g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d2g ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aryldialkylphosphatase Aryldialkylphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.8.1 3.1.8.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d2g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d2g OCA], [http://pdbe.org/2d2g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2d2g RCSB], [http://www.ebi.ac.uk/pdbsum/2d2g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2d2g ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q93LD7_RHIRD Q93LD7_RHIRD]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d2/2d2g_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d2/2d2g_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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==See Also==
==See Also==
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*[[Phosphotriesterase|Phosphotriesterase]]
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*[[Phosphotriesterase 3D structures|Phosphotriesterase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aryldialkylphosphatase]]
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[[Category: Agrobacterium tumefaciens]]
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[[Category: Carr, P D]]
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[[Category: Large Structures]]
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[[Category: Jackson, C]]
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[[Category: Carr PD]]
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[[Category: Kim, H K]]
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[[Category: Jackson C]]
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[[Category: Liu, J W]]
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[[Category: Kim HK]]
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[[Category: Ollis, D L]]
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[[Category: Liu JW]]
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[[Category: Hydrolase]]
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[[Category: Ollis DL]]
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[[Category: Metalloenzyme]]
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[[Category: Opda]]
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[[Category: Phosphotriesterase]]
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Current revision

OpdA from Agrobacterium radiobacter with bound product dimethylthiophosphate

PDB ID 2d2g

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Proteopedia Page Contributors and Editors (what is this?)

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