6qtb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6qtb" [edit=sysop:move=sysop])
Current revision (12:08, 24 January 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6qtb is ON HOLD until Paper Publication
+
==Crystal structure of Rea1-MIDAS/Ytm1-UBL complex from Chaetomium thermophilum==
 +
<StructureSection load='6qtb' size='340' side='right'caption='[[6qtb]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6qtb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Chaetomium_thermophilum_var._thermophilum_DSM_1495 Chaetomium thermophilum var. thermophilum DSM 1495]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QTB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6QTB FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6qtb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qtb OCA], [https://pdbe.org/6qtb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6qtb RCSB], [https://www.ebi.ac.uk/pdbsum/6qtb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6qtb ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/G0SHE6_CHATD G0SHE6_CHATD] Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits.[PIRNR:PIRNR010340]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The Rea1 AAA(+)-ATPase dislodges assembly factors from pre-60S ribosomes upon ATP hydrolysis, thereby driving ribosome biogenesis. Here, we present crystal structures of Rea1-MIDAS, the conserved domain at the tip of the flexible Rea1 tail, alone and in complex with its substrate ligands, the UBL domains of Rsa4 or Ytm1. These complexes have structural similarity to integrin alpha-subunit domains when bound to extracellular matrix ligands, which for integrin biology is a key determinant for force-bearing cell-cell adhesion. However, the presence of additional motifs equips Rea1-MIDAS for its tasks in ribosome maturation. One loop insert cofunctions as an NLS and to activate the mechanochemical Rea1 cycle, whereas an additional beta-hairpin provides an anchor to hold the ligand UBL domains in place. Our data show the versatility of the MIDAS fold for mechanical force transmission in processes as varied as integrin-mediated cell adhesion and mechanochemical removal of assembly factors from pre-ribosomes.
-
Authors:
+
Crystal structures of Rea1-MIDAS bound to its ribosome assembly factor ligands resembling integrin-ligand-type complexes.,Ahmed YL, Thoms M, Mitterer V, Sinning I, Hurt E Nat Commun. 2019 Jul 11;10(1):3050. doi: 10.1038/s41467-019-10922-6. PMID:31296859<ref>PMID:31296859</ref>
-
Description:
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
 +
<div class="pdbe-citations 6qtb" style="background-color:#fffaf0;"></div>
 +
 
 +
==See Also==
 +
*[[Ribosome biogenesis protein 3D structures|Ribosome biogenesis protein 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Chaetomium thermophilum var. thermophilum DSM 1495]]
 +
[[Category: Large Structures]]
 +
[[Category: Ahmed YL]]
 +
[[Category: Hurt E]]
 +
[[Category: Sinning I]]
 +
[[Category: Thoms M]]

Current revision

Crystal structure of Rea1-MIDAS/Ytm1-UBL complex from Chaetomium thermophilum

PDB ID 6qtb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools