4al2
From Proteopedia
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==peptide deformylase (Ni-form) with hydrosulfide== | ==peptide deformylase (Ni-form) with hydrosulfide== | ||
| - | <StructureSection load='4al2' size='340' side='right' | + | <StructureSection load='4al2' size='340' side='right'caption='[[4al2]], [[Resolution|resolution]] 2.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4al2]] is a 3 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4al2]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BL21(DE3) Escherichia coli BL21(DE3)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AL2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AL2 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=H2S:HYDROSULFURIC+ACID'>H2S</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4al2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4al2 OCA], [https://pdbe.org/4al2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4al2 RCSB], [https://www.ebi.ac.uk/pdbsum/4al2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4al2 ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/DEF_ECOLI DEF_ECOLI] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.[HAMAP-Rule:MF_00163] |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | + | [[Category: Hinrichs W]] | |
| - | [[Category: Hinrichs | + | [[Category: Palm GJ]] |
| - | [[Category: Palm | + | |
| - | + | ||
| - | + | ||
Current revision
peptide deformylase (Ni-form) with hydrosulfide
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