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| ==Plantago Major multifunctional oxidoreductase V150M mutant in complex with progesterone and NADP+== | | ==Plantago Major multifunctional oxidoreductase V150M mutant in complex with progesterone and NADP+== |
- | <StructureSection load='5mlm' size='340' side='right' caption='[[5mlm]], [[Resolution|resolution]] 2.56Å' scene=''> | + | <StructureSection load='5mlm' size='340' side='right'caption='[[5mlm]], [[Resolution|resolution]] 2.56Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5mlm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Common_plantain Common plantain]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MLM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MLM FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5mlm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plantago_major Plantago major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MLM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MLM FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=STR:PROGESTERONE'>STR</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.563Å</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-beta-hydroxy-Delta(5)-steroid_dehydrogenase 3-beta-hydroxy-Delta(5)-steroid dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.145 1.1.1.145] </span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=STR:PROGESTERONE'>STR</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mlm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mlm OCA], [http://pdbe.org/5mlm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mlm RCSB], [http://www.ebi.ac.uk/pdbsum/5mlm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mlm ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mlm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mlm OCA], [https://pdbe.org/5mlm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mlm RCSB], [https://www.ebi.ac.uk/pdbsum/5mlm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mlm ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/D6N9X1_PLAMJ D6N9X1_PLAMJ] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Common plantain]] | + | [[Category: Large Structures]] |
- | [[Category: Chisholm, J D]] | + | [[Category: Plantago major]] |
- | [[Category: Fellows, R]] | + | [[Category: Chisholm JD]] |
- | [[Category: Jez, J M]] | + | [[Category: Fellows R]] |
- | [[Category: Lee, S G]] | + | [[Category: Jez JM]] |
- | [[Category: Nanao, M]] | + | [[Category: Lee SG]] |
- | [[Category: Russo, C M]] | + | [[Category: Nanao M]] |
- | [[Category: Zubieta, C]] | + | [[Category: Russo CM]] |
- | [[Category: Enzyme evolution]]
| + | [[Category: Zubieta C]] |
- | [[Category: Iridoid synthase]]
| + | |
- | [[Category: Oxidoreductase]]
| + | |
- | [[Category: Progesterone reductase]]
| + | |
- | [[Category: Sdr]]
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| Structural highlights
Function
D6N9X1_PLAMJ
Publication Abstract from PubMed
The short chain dehydrogenase/reductase superfamily (SDR) is a large family of NAD(P)H-dependent enzymes found in all kingdoms of life. SDRs are particularly well-represented in plants, playing diverse roles in both primary and secondary metabolism. In addition, some plant SDRs are also able to catalyse a reductive cyclisation reaction critical for the biosynthesis of the iridoid backbone that contains a fused 5 and 6-membered ring scaffold. Mining the EST database of Plantago major, a medicinal plant that makes iridoids, we identified a putative 5beta-progesterone reductase gene, PmMOR (P. major multisubstrate oxido-reductase), that is 60% identical to the iridoid synthase gene from Catharanthus roseus. The PmMOR protein was recombinantly expressed and its enzymatic activity assayed against three putative substrates, 8-oxogeranial, citral and progesterone. The enzyme demonstrated promiscuous enzymatic activity and was able to not only reduce progesterone and citral, but also to catalyse the reductive cyclisation of 8-oxogeranial. The crystal structures of PmMOR wild type and PmMOR mutants in complex with NADP(+) or NAD(+) and either 8-oxogeranial, citral or progesterone help to reveal the substrate specificity determinants and catalytic machinery of the protein. Site-directed mutagenesis studies were performed and provide a foundation for understanding the promiscuous activity of the enzyme.
A multisubstrate reductase from Plantago major: structure-function in the short chain reductase superfamily.,Fellows R, Russo CM, Silva CS, Lee SG, Jez JM, Chisholm JD, Zubieta C, Nanao MH Sci Rep. 2018 Oct 4;8(1):14796. doi: 10.1038/s41598-018-32967-1. PMID:30287897[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Fellows R, Russo CM, Silva CS, Lee SG, Jez JM, Chisholm JD, Zubieta C, Nanao MH. A multisubstrate reductase from Plantago major: structure-function in the short chain reductase superfamily. Sci Rep. 2018 Oct 4;8(1):14796. doi: 10.1038/s41598-018-32967-1. PMID:30287897 doi:http://dx.doi.org/10.1038/s41598-018-32967-1
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