This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ar4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:31, 15 March 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 3: Line 3:
<StructureSection load='4ar4' size='340' side='right'caption='[[4ar4]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
<StructureSection load='4ar4' size='340' side='right'caption='[[4ar4]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ar4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43587 Atcc 43587]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AR4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4AR4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ar4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AR4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=D3O:TRIDEUTERIOOXIDANIUM'>D3O</scene>, <scene name='pdbligand=D8U:DEUTERIUM(1+)'>D8U</scene>, <scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=D3O:TRIDEUTERIOOXIDANIUM'>D3O</scene>, <scene name='pdbligand=D8U:DEUTERIUM(1+)'>D8U</scene>, <scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bq8|1bq8]], [[1bq9|1bq9]], [[1brf|1brf]], [[1caa|1caa]], [[1cad|1cad]], [[1iu5|1iu5]], [[1iu6|1iu6]], [[1qcv|1qcv]], [[1rwd|1rwd]], [[1vcx|1vcx]], [[1zrp|1zrp]], [[4ar3|4ar3]], [[4ar5|4ar5]], [[4ar6|4ar6]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ar4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ar4 OCA], [https://pdbe.org/4ar4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ar4 RCSB], [https://www.ebi.ac.uk/pdbsum/4ar4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ar4 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ar4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ar4 OCA], [http://pdbe.org/4ar4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ar4 RCSB], [http://www.ebi.ac.uk/pdbsum/4ar4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ar4 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RUBR_PYRFU RUBR_PYRFU]] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.
+
[https://www.uniprot.org/uniprot/RUBR_PYRFU RUBR_PYRFU] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 18:
</div>
</div>
<div class="pdbe-citations 4ar4" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4ar4" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Rubredoxin 3D structures|Rubredoxin 3D structures]]
 +
*[[Rubredoxin PDB structures|Rubredoxin PDB structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 43587]]
+
[[Category: Large Structures]]
-
[[Category: Blakeley, M P]]
+
[[Category: Pyrococcus furiosus DSM 3638]]
-
[[Category: Cuypers, M G]]
+
[[Category: Blakeley MP]]
-
[[Category: Forsyth, V T]]
+
[[Category: Cuypers MG]]
-
[[Category: Haertlein, M]]
+
[[Category: Forsyth VT]]
-
[[Category: Mason, S A]]
+
[[Category: Haertlein M]]
-
[[Category: Mitchell, E P]]
+
[[Category: Mason SA]]
-
[[Category: Electron transport]]
+
[[Category: Mitchell EP]]
-
[[Category: Hydronium]]
+
-
[[Category: Monochromatic neutron crystallography]]
+
-
[[Category: Perdeuterated]]
+
-
[[Category: Protonation state]]
+

Current revision

Neutron crystallographic structure of the reduced form perdeuterated Pyrococcus furiosus rubredoxin to 1.38 Angstrom resolution.

PDB ID 4ar4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4ar4"
Personal tools