4bxw

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<StructureSection load='4bxw' size='340' side='right'caption='[[4bxw]], [[Resolution|resolution]] 2.71&Aring;' scene=''>
<StructureSection load='4bxw' size='340' side='right'caption='[[4bxw]], [[Resolution|resolution]] 2.71&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4bxw]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Eastern_brown_snake Eastern brown snake]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BXW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BXW FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4bxw]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Pseudonaja_textilis Pseudonaja textilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BXW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BXW FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=0GJ:L-ALPHA-GLUTAMYL-N-{(1S)-4-{[AMINO(IMINIO)METHYL]AMINO}-1-[(1S)-2-CHLORO-1-HYDROXYETHYL]BUTYL}GLYCINAMIDE'>0GJ</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.71&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4bxs|4bxs]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0GJ:L-ALPHA-GLUTAMYL-N-{(1S)-4-{[AMINO(IMINIO)METHYL]AMINO}-1-[(1S)-2-CHLORO-1-HYDROXYETHYL]BUTYL}GLYCINAMIDE'>0GJ</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4bxw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bxw OCA], [http://pdbe.org/4bxw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4bxw RCSB], [http://www.ebi.ac.uk/pdbsum/4bxw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4bxw ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bxw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bxw OCA], [https://pdbe.org/4bxw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bxw RCSB], [https://www.ebi.ac.uk/pdbsum/4bxw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bxw ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/FAXC_PSETE FAXC_PSETE] Snake prothrombin activator that attacks the hemostatic system of prey. This non-catalytic subunit is functionally similar to blood coagulation factor V (PubMed:12362232, PubMed:23869089). It serves as a critical cofactor for the prothrombinase activity of the catalytic subunit, which is similar to the blood coagulation factor X (PubMed:12362232, PubMed:23869089). The complex converts prothrombin to thrombin by sequential cleavage at two positions, Arg-320 followed by Arg-271 (PubMed:23869089). Cleavage at Arg-320 produces an active intermediate known as meizothrombin (PubMed:23869089). Meizothrombin is the 'second' substrate for prothrombinase, and it docks in an altered manner to present the second cleavage site (271) (PubMed:23869089). Cleavage at Arg-271 releases active thrombin from its pro-fragment (PubMed:23869089). This order of events is reversed if the protease component of prothrombinase is used on its own, suggesting that the 271 site is inherently more accessible to proteolysis (PubMed:23869089). The complex converts prothrombin to thrombin in presence but also in the absence of membrane (PubMed:23869089).<ref>PMID:12362232</ref> <ref>PMID:23869089</ref>
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<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Eastern brown snake]]
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[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Adams, T E]]
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[[Category: Pseudonaja textilis]]
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[[Category: Camire, R M]]
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[[Category: Adams TE]]
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[[Category: Huntington, J A]]
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[[Category: Camire RM]]
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[[Category: Johnson, D J.D]]
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[[Category: Huntington JA]]
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[[Category: Krishnaswamy, S]]
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[[Category: Johnson DJD]]
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[[Category: Lechtenberg, B C]]
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[[Category: Krishnaswamy S]]
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[[Category: Murray-Rust, T A]]
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[[Category: Lechtenberg BC]]
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[[Category: Blood clotting]]
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[[Category: Murray-Rust TA]]
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[[Category: Blood coagulation]]
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[[Category: Factor v]]
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[[Category: Factor x]]
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[[Category: Hydrolase]]
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[[Category: Protease]]
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[[Category: Prothrombinase]]
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Current revision

Crystal Structure of the Prothrombinase Complex from the Venom of Pseudonaja Textilis

PDB ID 4bxw

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