6o95

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(New page: '''Unreleased structure''' The entry 6o95 is ON HOLD Authors: Yu, C., Drobnick, J., Bryan, M.C., Kiefer, J., Lupardus, P.J. Description: Structure of the IRAK4 kinase domain with compo...)
Current revision (08:11, 17 October 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6o95 is ON HOLD
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==Structure of the IRAK4 kinase domain with compound 41==
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<StructureSection load='6o95' size='340' side='right'caption='[[6o95]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6o95]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6O95 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6O95 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.77&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LSV:N-[(2R)-2-(hydroxymethyl)-2-methyl-6-(morpholin-4-yl)-2,3-dihydro-1-benzofuran-5-yl]pyrazolo[1,5-a]pyrimidine-3-carboxamide'>LSV</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6o95 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6o95 OCA], [https://pdbe.org/6o95 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6o95 RCSB], [https://www.ebi.ac.uk/pdbsum/6o95 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6o95 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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A series of pyrazolopyrimidine inhibitors of IRAK4 were developed from a high-throughput screen (HTS). Modification of an HTS hit led to a series of bicyclic heterocycles with improved potency and kinase selectivity but lacking sufficient solubility to progress in vivo. Structure-based drug design, informed by cocrystal structures with the protein and small-molecule crystal structures, yielded a series of dihydrobenzofurans. This semisaturated bicycle provided superior druglike properties while maintaining excellent potency and selectivity. Improved physicochemical properties allowed for progression into in vivo experiments, where lead molecules exhibited low clearance and showed target-based inhibition of IRAK4 signaling in an inflammation-mediated PK/PD mouse model.
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Authors: Yu, C., Drobnick, J., Bryan, M.C., Kiefer, J., Lupardus, P.J.
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Development of Potent and Selective Pyrazolopyrimidine IRAK4 Inhibitors.,Bryan MC, Drobnick J, Gobbi A, Kolesnikov A, Chen Y, Rajapaksa N, Ndubaku C, Feng J, Chang W, Francis R, Yu C, Choo EF, DeMent K, Ran Y, An L, Emson C, Huang Z, Sujatha-Bhaskar S, Brightbill H, DiPasquale A, Maher J, Wai J, McKenzie BS, Lupardus PJ, Zarrin AA, Kiefer JR J Med Chem. 2019 May 24. doi: 10.1021/acs.jmedchem.9b00439. PMID:31082230<ref>PMID:31082230</ref>
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Description: Structure of the IRAK4 kinase domain with compound 41
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Yu, C]]
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<div class="pdbe-citations 6o95" style="background-color:#fffaf0;"></div>
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[[Category: Lupardus, P.J]]
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[[Category: Kiefer, J]]
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==See Also==
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[[Category: Drobnick, J]]
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*[[Interleukin-1 receptor-associated kinase|Interleukin-1 receptor-associated kinase]]
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[[Category: Bryan, M.C]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Bryan MC]]
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[[Category: Drobnick J]]
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[[Category: Kiefer J]]
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[[Category: Lupardus PJ]]
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[[Category: Yu C]]

Current revision

Structure of the IRAK4 kinase domain with compound 41

PDB ID 6o95

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