6qgb

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==Crystal structure of a plastic degrading enzyme in complex with a ligand==
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==Crystal structure of Ideonella sakaiensis MHETase bound to benzoic acid==
<StructureSection load='6qgb' size='340' side='right'caption='[[6qgb]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='6qgb' size='340' side='right'caption='[[6qgb]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6qgb]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QGB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6QGB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6qgb]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Ideonella_sakaiensis Ideonella sakaiensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QGB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6QGB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BEZ:BENZOIC+ACID'>BEZ</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mono(ethylene_terephthalate)_hydrolase Mono(ethylene terephthalate) hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.102 3.1.1.102] </span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEZ:BENZOIC+ACID'>BEZ</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6qgb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qgb OCA], [http://pdbe.org/6qgb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6qgb RCSB], [http://www.ebi.ac.uk/pdbsum/6qgb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6qgb ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6qgb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qgb OCA], [https://pdbe.org/6qgb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6qgb RCSB], [https://www.ebi.ac.uk/pdbsum/6qgb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6qgb ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MHETH_PISS1 MHETH_PISS1] Involved in the degradation and assimilation of the plastic poly(ethylene terephthalate) (PET), which allows I.sakaiensis to use PET as its major energy and carbon source for growth. Likely acts synergistically with PETase to depolymerize PET. Catalyzes the hydrolysis of mono(2-hydroxyethyl) terephthalate (MHET) into its two environmentally benign monomers, terephthalate and ethylene glycol. Does not show activity against PET, bis(hydroxyethyl) terephthalate (BHET), pNP-aliphatic esters or typical aromatic ester compounds catalyzed by the tannase family enzymes, such as ethyl gallate and ethyl ferulate.<ref>PMID:26965627</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The extreme durability of polyethylene terephthalate (PET) debris has rendered it a long-term environmental burden. At the same time, current recycling efforts still lack sustainability. Two recently discovered bacterial enzymes that specifically degrade PET represent a promising solution. First, Ideonella sakaiensis PETase, a structurally well-characterized consensus alpha/beta-hydrolase fold enzyme, converts PET to mono-(2-hydroxyethyl) terephthalate (MHET). MHETase, the second key enzyme, hydrolyzes MHET to the PET educts terephthalate and ethylene glycol. Here, we report the crystal structures of active ligand-free MHETase and MHETase bound to a nonhydrolyzable MHET analog. MHETase, which is reminiscent of feruloyl esterases, possesses a classic alpha/beta-hydrolase domain and a lid domain conferring substrate specificity. In the light of structure-based mapping of the active site, activity assays, mutagenesis studies and a first structure-guided alteration of substrate specificity towards bis-(2-hydroxyethyl) terephthalate (BHET) reported here, we anticipate MHETase to be a valuable resource to further advance enzymatic plastic degradation.
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Structure of the plastic-degrading Ideonella sakaiensis MHETase bound to a substrate.,Palm GJ, Reisky L, Bottcher D, Muller H, Michels EAP, Walczak MC, Berndt L, Weiss MS, Bornscheuer UT, Weber G Nat Commun. 2019 Apr 12;10(1):1717. doi: 10.1038/s41467-019-09326-3. PMID:30979881<ref>PMID:30979881</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6qgb" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Ideonella sakaiensis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Berndt, L]]
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[[Category: Berndt L]]
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[[Category: Boettcher, D]]
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[[Category: Boettcher D]]
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[[Category: Bornscheuer, U T]]
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[[Category: Bornscheuer UT]]
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[[Category: Michels, E A.P]]
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[[Category: Michels EAP]]
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[[Category: Mueller, H]]
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[[Category: Mueller H]]
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[[Category: Palm, G J]]
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[[Category: Palm GJ]]
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[[Category: Reisky, L]]
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[[Category: Reisky L]]
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[[Category: Walczak, C]]
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[[Category: Walczak C]]
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[[Category: Weber, G]]
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[[Category: Weber G]]
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[[Category: Weiss, M S]]
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[[Category: Weiss MS]]
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[[Category: Alpha/beta hydrolase fold]]
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[[Category: Hydrolase]]
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[[Category: I. sakaiensis catalytic triad]]
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[[Category: Plastic-degrading hydrolase]]
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Current revision

Crystal structure of Ideonella sakaiensis MHETase bound to benzoic acid

PDB ID 6qgb

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