6r7r
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of the glutamate transporter homologue GltTk in complex with D-aspartate== | |
+ | <StructureSection load='6r7r' size='340' side='right'caption='[[6r7r]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6r7r]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis_KOD1 Thermococcus kodakarensis KOD1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6R7R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6R7R FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=DAS:D-ASPARTIC+ACID'>DAS</scene>, <scene name='pdbligand=DMU:DECYL-BETA-D-MALTOPYRANOSIDE'>DMU</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6r7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6r7r OCA], [https://pdbe.org/6r7r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6r7r RCSB], [https://www.ebi.ac.uk/pdbsum/6r7r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6r7r ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q5JID0_THEKO Q5JID0_THEKO] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Mammalian glutamate transporters are crucial players in neuronal communication as they perform neurotransmitter reuptake from the synaptic cleft. Besides L-glutamate and L-aspartate, they also recognize D-aspartate, which might participate in mammalian neurotransmission and/or neuromodulation. Much of the mechanistic insight in glutamate transport comes from studies of the archaeal homologues GltPh from Pyrococcus horikoshii and GltTk from Thermococcus kodakarensis. Here, we show that GltTk transports D-aspartate with identical Na(+) : substrate coupling stoichiometry as L-aspartate, and that the affinities (Kd and Km) for the two substrates are similar. We determined a crystal structure of GltTk with bound D-aspartate at 2.8 A resolution. Comparison of the L- and D-aspartate bound GltTk structures revealed that D-aspartate is accommodated with only minor rearrangements in the structure of the binding site. The structure explains how the geometrically different molecules L- and D-aspartate are recognized and transported by the protein in the same way. | ||
- | + | Binding and transport of D-aspartate by the glutamate transporter homologue GltTk.,Arkhipova V, Trinco G, Ettema TW, Jensen S, Slotboom D, Guskov A Elife. 2019 Apr 10;8. pii: 45286. doi: 10.7554/eLife.45286. PMID:30969168<ref>PMID:30969168</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Arkhipova | + | <div class="pdbe-citations 6r7r" style="background-color:#fffaf0;"></div> |
- | [[Category: Guskov | + | |
- | [[Category: Slotboom | + | ==See Also== |
+ | *[[Symporter 3D structures|Symporter 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Thermococcus kodakarensis KOD1]] | ||
+ | [[Category: Arkhipova V]] | ||
+ | [[Category: Guskov A]] | ||
+ | [[Category: Slotboom DJ]] |
Current revision
Crystal structure of the glutamate transporter homologue GltTk in complex with D-aspartate
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