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6fz6

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Current revision (05:14, 21 November 2024) (edit) (undo)
 
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<StructureSection load='6fz6' size='340' side='right'caption='[[6fz6]], [[Resolution|resolution]] 1.42&Aring;' scene=''>
<StructureSection load='6fz6' size='340' side='right'caption='[[6fz6]], [[Resolution|resolution]] 1.42&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6fz6]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FZ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FZ6 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6fz6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphaerobacter_thermophilus_DSM_20745 Sphaerobacter thermophilus DSM 20745]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FZ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6FZ6 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.42&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SMC:S-METHYLCYSTEINE'>SMC</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=SMC:S-METHYLCYSTEINE'>SMC</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/23S_rRNA_(adenine(2503)-C(2))-methyltransferase 23S rRNA (adenine(2503)-C(2))-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.192 2.1.1.192] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fz6 OCA], [https://pdbe.org/6fz6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6fz6 RCSB], [https://www.ebi.ac.uk/pdbsum/6fz6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6fz6 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fz6 OCA], [http://pdbe.org/6fz6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fz6 RCSB], [http://www.ebi.ac.uk/pdbsum/6fz6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fz6 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/D1C4T7_SPHTD D1C4T7_SPHTD]] Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.[HAMAP-Rule:MF_01849][SAAS:SAAS00721833]
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[https://www.uniprot.org/uniprot/D1C4T7_SPHTD D1C4T7_SPHTD] Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.[HAMAP-Rule:MF_01849][SAAS:SAAS00721833]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Hinchliffe, P]]
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[[Category: Sphaerobacter thermophilus DSM 20745]]
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[[Category: Shaw, J M]]
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[[Category: Hinchliffe P]]
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[[Category: Spencer, J]]
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[[Category: Shaw JM]]
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[[Category: Antibiotic resistance]]
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[[Category: Spencer J]]
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[[Category: Methyltransferase]]
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[[Category: Radical sam]]
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[[Category: Rrna]]
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[[Category: Transferase]]
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Current revision

Crystal Structure of a radical SAM methyltransferase from Sphaerobacter thermophilus

PDB ID 6fz6

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