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| | <StructureSection load='4n6s' size='340' side='right'caption='[[4n6s]], [[Resolution|resolution]] 2.40Å' scene=''> | | <StructureSection load='4n6s' size='340' side='right'caption='[[4n6s]], [[Resolution|resolution]] 2.40Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4n6s]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N6S OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4N6S FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4n6s]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermostichus_vulcanus Thermostichus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N6S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4N6S FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
| - | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene>, <scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3o18|3o18]], [[3o2c|3o2c]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4n6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4n6s OCA], [https://pdbe.org/4n6s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4n6s RCSB], [https://www.ebi.ac.uk/pdbsum/4n6s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4n6s ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4n6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4n6s OCA], [http://pdbe.org/4n6s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4n6s RCSB], [http://www.ebi.ac.uk/pdbsum/4n6s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4n6s ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/Q9AM02_THEVL Q9AM02_THEVL] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | </StructureSection> | | </StructureSection> |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Thermosynechococcus vulcanus]] | + | [[Category: Thermostichus vulcanus]] |
| - | [[Category: Adir, N]] | + | [[Category: Adir N]] |
| - | [[Category: Arteni, A]] | + | [[Category: Arteni A]] |
| - | [[Category: Blankenship, R E]] | + | [[Category: Blankenship RE]] |
| - | [[Category: David, L]] | + | [[Category: David L]] |
| - | [[Category: Elmlund, D A]] | + | [[Category: Elmlund DA]] |
| - | [[Category: Prado, M]] | + | [[Category: Prado M]] |
| - | [[Category: Antenna]]
| + | |
| - | [[Category: Glutaraldehyde cross-link]]
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| - | [[Category: Membrane associated]]
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| - | [[Category: Photosynthesis]]
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| Structural highlights
Function
Q9AM02_THEVL
Publication Abstract from PubMed
The major light harvesting complex in cyanobacteria and red algae is the phycobilisome (PBS), comprised of hundreds of seemingly similar chromophores, which are protein bound and assembled in a fashion that enables highly efficient uni-directional energy transfer to reaction centers. The PBS is comprised of a core containing 2-5 cylinders surrounded by 6-8 rods, and a number of models have been proposed describing the PBS structure. One of the most critical steps in the functionality of the PBS is energy transfer from the rod substructures to the core substructure. In this study we compare the structural and functional characteristics of high-phosphate stabilized PBS (the standard fashion of stabilization of isolated complexes) with cross-linked PBS in low ionic strength buffer from two cyanobacterial species, Thermosynechococcus vulcanus and Acaryochloris marina. We show that chemical cross-linking preserves efficient energy transfer from the phycocyanin containing rods to the allophycocyanin containing cores with fluorescent emission from the terminal emitters. However, this energy transfer is shown to exist in PBS complexes of different structures as characterized by determination of a 2.4A structure by X-ray crystallography, single crystal confocal microscopy, mass spectrometry and transmission electron microscopy of negatively stained and cryogenically preserved complexes. We conclude that the PBS has intrinsic structural properties that enable efficient energy transfer from rod substructures to the core substructures without requiring a single unique structure. We discuss the significance of our observations on the functionality of the PBS in vivo.
Structural studies show energy transfer within stabilized phycobilisomes independent of the mode of rod-core assembly.,David L, Prado M, Arteni AA, Elmlund DA, Blankenship RE, Adir N Biochim Biophys Acta. 2014 Jan 6;1837(3):385-395. doi:, 10.1016/j.bbabio.2013.12.014. PMID:24407142[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ David L, Prado M, Arteni AA, Elmlund DA, Blankenship RE, Adir N. Structural studies show energy transfer within stabilized phycobilisomes independent of the mode of rod-core assembly. Biochim Biophys Acta. 2014 Jan 6;1837(3):385-395. doi:, 10.1016/j.bbabio.2013.12.014. PMID:24407142 doi:http://dx.doi.org/10.1016/j.bbabio.2013.12.014
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