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| <StructureSection load='4p0d' size='340' side='right'caption='[[4p0d]], [[Resolution|resolution]] 1.90Å' scene=''> | | <StructureSection load='4p0d' size='340' side='right'caption='[[4p0d]], [[Resolution|resolution]] 1.90Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4p0d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Strp6 Strp6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P0D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P0D FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4p0d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_MGAS10394 Streptococcus pyogenes MGAS10394]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4P0D FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tee6, M6_Spy0160 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=286636 STRP6])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p0d OCA], [http://pdbe.org/4p0d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4p0d RCSB], [http://www.ebi.ac.uk/pdbsum/4p0d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4p0d ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4p0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p0d OCA], [https://pdbe.org/4p0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4p0d RCSB], [https://www.ebi.ac.uk/pdbsum/4p0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4p0d ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/TEE6_STRP6 TEE6_STRP6] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Strp6]] | + | [[Category: Streptococcus pyogenes MGAS10394]] |
- | [[Category: Atatoa-Carr, P]] | + | [[Category: Atatoa-Carr P]] |
- | [[Category: Baker, E N]] | + | [[Category: Baker EN]] |
- | [[Category: Bell, A]] | + | [[Category: Bell A]] |
- | [[Category: Loh, J M]] | + | [[Category: Loh JM]] |
- | [[Category: Moreland, N J]] | + | [[Category: Moreland NJ]] |
- | [[Category: Proft, T]] | + | [[Category: Proft T]] |
- | [[Category: Young, P G]] | + | [[Category: Young PG]] |
- | [[Category: Ig-like foldisopeptide bondsortase motifgram-positive pili]]
| + | |
- | [[Category: Structural protein]]
| + | |
| Structural highlights
Function
TEE6_STRP6
Publication Abstract from PubMed
Group A streptococcus (GAS; Streptococcus pyogenes) is a Gram-positive human pathogen that causes a broad range of diseases ranging from acute pharyngitis to the poststreptococcal sequelae of acute rheumatic fever. GAS pili are highly diverse, long protein polymers that extend from the cell surface. They have multiple roles in infection and are promising candidates for vaccine development. This study describes the structure of the T6 backbone pilin (BP; Lancefield T-antigen) from the important M6 serotype. The structure reveals a modular arrangement of three tandem immunoglobulin-like domains, two with internal isopeptide bonds. The T6 pilin lysine, essential for polymerization, is located in a novel VAKS motif that is structurally homologous to the canonical YPKN pilin lysine in other three- and four-domain Gram-positive pilins. The T6 structure also highlights a conserved pilin core whose surface is decorated with highly variable loops and extensions. Comparison to other Gram-positive BPs shows that many of the largest variable extensions are found in conserved locations. Studies with sera from patients diagnosed with GAS-associated acute rheumatic fever showed that each of the three T6 domains, and the largest of the variable extensions (V8), are targeted by IgG during infection in vivo. Although the GAS BP show large variations in size and sequence, the modular nature of the pilus proteins revealed by the T6 structure may aid the future design of a pilus-based vaccine.
Structural Conservation, Variability, and Immunogenicity of the T6 Backbone Pilin of Serotype M6 Streptococcus pyogenes.,Young PG, Moreland NJ, Loh JM, Bell A, Atatoa Carr P, Proft T, Baker EN Infect Immun. 2014 Jul;82(7):2949-57. doi: 10.1128/IAI.01706-14. Epub 2014 Apr, 28. PMID:24778112[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Young PG, Moreland NJ, Loh JM, Bell A, Atatoa Carr P, Proft T, Baker EN. Structural Conservation, Variability, and Immunogenicity of the T6 Backbone Pilin of Serotype M6 Streptococcus pyogenes. Infect Immun. 2014 Jul;82(7):2949-57. doi: 10.1128/IAI.01706-14. Epub 2014 Apr, 28. PMID:24778112 doi:http://dx.doi.org/10.1128/IAI.01706-14
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