4otv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:41, 1 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4otv' size='340' side='right'caption='[[4otv]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='4otv' size='340' side='right'caption='[[4otv]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4otv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Operophtera_brumata_cypovirus_18 Operophtera brumata cypovirus 18]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OTV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4otv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Operophtera_brumata_cypovirus_18 Operophtera brumata cypovirus 18]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OTV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OTV FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ots|4ots]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4otv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4otv OCA], [http://pdbe.org/4otv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4otv RCSB], [http://www.ebi.ac.uk/pdbsum/4otv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4otv ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4otv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4otv OCA], [https://pdbe.org/4otv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4otv RCSB], [https://www.ebi.ac.uk/pdbsum/4otv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4otv ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
+
== Function ==
-
== Publication Abstract from PubMed ==
+
[https://www.uniprot.org/uniprot/Q30C70_9VIRU Q30C70_9VIRU]
-
This work demonstrates that with the use of a microfocus synchrotron beam the structure of a novel viral polyhedrin could be successfully determined from microcrystals within cells, removing the preparatory step of sample isolation and maintaining a favourable biological environment. The data obtained are of high quality, comparable to that obtained from isolated crystals, and enabled a facile structure determination. A small but significant difference is observed between the unit-cell parameters and the mosaic spread of in cellulo and isolated crystals, suggesting that even these robust crystals are adversely affected by removal from the cell.
+
-
In cellulo structure determination of a novel cypovirus polyhedrin.,Axford D, Ji X, Stuart DI, Sutton G Acta Crystallogr D Biol Crystallogr. 2014 May;70(Pt 5):1435-41. doi:, 10.1107/S1399004714004714. Epub 2014 Apr 30. PMID:24816111<ref>PMID:24816111</ref>
+
==See Also==
-
 
+
*[[Polyhedrin|Polyhedrin]]
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 4otv" style="background-color:#fffaf0;"></div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Operophtera brumata cypovirus 18]]
[[Category: Operophtera brumata cypovirus 18]]
-
[[Category: Axford, D]]
+
[[Category: Axford D]]
-
[[Category: Ji, X]]
+
[[Category: Ji X]]
-
[[Category: Stuart, D I]]
+
[[Category: Stuart DI]]
-
[[Category: Sutton, G C]]
+
[[Category: Sutton GC]]
-
[[Category: Microcrystal]]
+
-
[[Category: Natural crystal to protect virus]]
+
-
[[Category: Occlusion body]]
+
-
[[Category: Polyhedra]]
+
-
[[Category: Viral protein]]
+

Current revision

Crystal structure of in cellulo Operophtera brumata CPV18

PDB ID 4otv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools